tfcp2l1.S (Xenopus laevis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 XB-GENE-6255174 T199609_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TFCP2L1
M04885_2.00 		Homo sapiens
DCYRGHHNNNDCYRGH
DCYRGHNNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_HT-SELEX 		0.913 0.913
TFCP2L1
M10609_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP9_01 		0.913 0.913
TFCP2L1
M04886_2.00 		Homo sapiens
DCYRGHHNNDDCYRGH
DCYRGHHNNDDCYRGH		 SELEX
Yin et al.(2017)
TFCP2L1_eDBD_Methyl-HT-SELEX 		0.913 0.913
Tcfcp2l1
M08029_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfc2pI1 		0.899 0.899
Tcfcp2l1
M08030_2.00 		Mus musculus
CYRGYYYHDDCYRGHYYNNNN
NNNNRRDCYRGHHDRRRCYRG		 ChIP-seq
Chen et al.(2011)
SRP000217_Tcfcp2I1 		0.899 0.899
Tcfcp2l1
M09127_2.00 		Mus musculus
DDCYRGYTYHNDCYRGHYB
VRDCYRGHNDRARCYRGHH		 Misc
Kulakovskiy et al.(2013)
TF2L1_MOUSE.H11MO.0.C 		0.899 0.899
ENSGALG00000002235
M02030_2.00 		Gallus gallus
AACCGGTTA
TAACCGGTT		 PBM
Weirauch et al.(2014)
pTH8565 		0.841 0.841
UBP1
M04893_2.00 		Homo sapiens
NDCYRGHNNNNDCYRGHN
NDCYRGHNNNNDCYRGHN		 SELEX
Yin et al.(2017)
UBP1_eDBD_HT-SELEX 		0.768 0.768
UBP1
M10614_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6_01 		0.768 0.768
UBP1
M10615_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$LBP1_Q6 		0.768 0.768
UBP1
M04894_2.00 		Homo sapiens
DWCYRGHHNNDDCYRGWH
DWCYRGHHNNDDCYRGWH		 SELEX
Yin et al.(2017)
UBP1_eDBD_Methyl-HT-SELEX 		0.768 0.768
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAH59295 Grainyhead 27 240

Links

Other Grainyhead family TFs
Other Xenopus laevis TFs

191 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
tfcp2l1.L Xenopus laevis XB-GENE-997202 I 0.976
ENSPSIG00000008408 Pelodiscus sinensis ENSPSIG00000008408 I 0.937
ENSFALG00000013230 Ficedula albicollis ENSFALG00000013230 I 0.932
Tal_R011103 Tyto alba Tal_R011103 I 0.932
Brh_R004848 Buceros rhinoceros Brh_R004848 I 0.932
Cmyd_10009085 Chelonia mydas Cmyd_10009085 I 0.932
Gfo_R001211 Geospiza fortis Gfo_R001211 I 0.932
Afo_R006827 Aptenodytes forsteri Afo_R006827 I 0.932
Aan_R003641 Calypte anna Aan_R003641 I 0.932
TFCP2L1 Gallus gallus ENSGALG00000011635 I 0.928
ENSSHAG00000013877 Sarcophilus harrisii ENSSHAG00000013877 I 0.928
TFCP2L1 Meleagris gallopavo ENSMGAG00000011889 I 0.928
TFCP2L1 Anolis carolinensis ENSACAG00000004268 I 0.928
TFCP2L1 Monodelphis domestica ENSMODG00000000229 I 0.928
TFCP2L1 Ornithorhynchus anatinus ENSOANG00000007591 I 0.923
ENSAPLG00000015648 Anas platyrhynchos ENSAPLG00000015648 I 0.923
TFCP2L1 Taeniopygia guttata ENSTGUG00000004573 I 0.923
Pvit_06471 Pogona vitticeps Pvit_06471 I 0.923
TFCP2L1 Canis familiaris ENSCAFG00000004788 I 0.918
TFCP2L1 Loxodonta africana ENSLAFG00000006873 I 0.918
ENSCSAG00000016679 Chlorocebus sabaeus ENSCSAG00000016679 I 0.913
TFCP2L1 Otolemur garnettii ENSOGAG00000012031 I 0.913
TFCP2L1 Oryctolagus cuniculus ENSOCUG00000006877 I 0.913
ENSOARG00000013124 Ovis aries ENSOARG00000013124 I 0.913
TFCP2L1 Gorilla gorilla ENSGGOG00000001680 I 0.913
TFCP2L1 Sus scrofa ENSSSCG00000015732 I 0.913
TFCP2L1 Homo sapiens ENSG00000115112 D 0.913
TFCP2L1 Pan troglodytes ENSPTRG00000012415 I 0.913
TFCP2L1 Felis catus ENSFCAG00000012143 I 0.913
ENSAMEG00000005284 Ailuropoda melanoleuca ENSAMEG00000005284 I 0.913
ENSPANG00000016702 Papio anubis ENSPANG00000016702 I 0.913
ENSPPYG00000012777 Pongo abelii ENSPPYG00000012777 I 0.913
TFCP2L1 Microcebus murinus ENSMICG00000007161 I 0.908
Alligator_sinensis_CCG001515.1 Alligator sinensis Alligator_sinensis_CCG001515.1 I 0.908
TFCP2L1 Bos taurus ENSBTAG00000007765 I 0.908
Tfcp2l1 Rattus norvegicus ENSRNOG00000002414 I 0.908
TFCP2L1 Callithrix jacchus ENSCJAG00000013356 I 0.908
ENSNLEG00000000988 Nomascus leucogenys ENSNLEG00000000988 I 0.908
TFCP2L1 Cavia porcellus ENSCPOG00000011523 I 0.903
ENSTSYG00000013882 Tarsius syrichta ENSTSYG00000013882 I 0.903
ENSP00000263707-D1 Bos grunniens ENSP00000263707-D1 I 0.903
ENSSTOG00000013080 Ictidomys tridecemlineatus ENSSTOG00000013080 I 0.899
Myotis_brandtii_TFCP2L1_10019079 Myotis brandtii Myotis_brandtii_TFCP2L1_10019079 I 0.899
Tcfcp2l1 Mus musculus ENSMUSG00000026380 D 0.899
TFCP2L1 Equus caballus ENSECAG00000024837 I 0.899
TFCP2L1 Macaca mulatta ENSMMUG00000008829 I 0.865
ENSTGUG00000015251 Taeniopygia guttata ENSTGUG00000015251 I 0.851
Gfo_R015659 Geospiza fortis Gfo_R015659 I 0.845
ENSMPUG00000001036 Mustela putorius furo ENSMPUG00000001036 I 0.845
Pvit_07455 Pogona vitticeps Pvit_07455 I 0.845
ENSONIG00000016680 Oreochromis niloticus ENSONIG00000016680 I 0.841
tfcp2 Danio rerio ENSDARG00000060306 I 0.841
Aan_R009566 Calypte anna Aan_R009566 I 0.841
TFCP2 Anolis carolinensis ENSACAG00000012289 I 0.841
ENSGALG00000002235 Gallus gallus ENSGALG00000002235 D 0.841
Tal_R010177 Tyto alba Tal_R010177 I 0.841
TFCP2 Macaca mulatta ENSMMUG00000000152 I 0.836
ENSCSAG00000005909 Chlorocebus sabaeus ENSCSAG00000005909 I 0.836
ENSPPYG00000004522 Pongo abelii ENSPPYG00000004522 I 0.836
TFCP2 Equus caballus ENSECAG00000020650 I 0.836
TFCP2 Pan troglodytes ENSPTRG00000004949 I 0.836
Cmyd_10002729 Chelonia mydas Cmyd_10002729 I 0.836
tfcp2 Gasterosteus aculeatus ENSGACG00000010929 I 0.836
TFCP2 Otolemur garnettii ENSOGAG00000007969 I 0.836
TFCP2 Homo sapiens ENSG00000135457 D 0.836
ENSNLEG00000017779 Nomascus leucogenys ENSNLEG00000017779 I 0.836
TFCP2 Canis familiaris ENSCAFG00000007831 I 0.836
ENSPANG00000019744 Papio anubis ENSPANG00000019744 I 0.836
ENSAMEG00000002108 Ailuropoda melanoleuca ENSAMEG00000002108 I 0.836
TFCP2 Loxodonta africana ENSLAFG00000009123 I 0.836
TFCP2 Felis catus ENSFCAG00000030292 I 0.836
TFCP2 Callithrix jacchus ENSCJAG00000017599 I 0.836
ENSLOCG00000004816 Lepisosteus oculatus ENSLOCG00000004816 I 0.831
TFCP2 Bos taurus ENSBTAG00000019312 I 0.831
ENSSHAG00000000901 Sarcophilus harrisii ENSSHAG00000000901 I 0.831
TFCP2 Vicugna pacos ENSVPAG00000007617 I 0.831
ENSAMXG00000016608 Astyanax mexicanus ENSAMXG00000016608 I 0.831
TFCP2 Myotis lucifugus ENSMLUG00000013918 I 0.831
ENSP00000283628-D2 Bos grunniens ENSP00000283628-D2 I 0.831
tfcp2 Oryzias latipes ENSORLG00000015644 I 0.826
ENSOARG00000017390 Ovis aries ENSOARG00000017390 I 0.826
Tfcp2 Rattus norvegicus ENSRNOG00000032395 I 0.826
Myotis_brandtii_TFCP2_10023086 Myotis brandtii Myotis_brandtii_TFCP2_10023086 I 0.826
TFCP2 Ochotona princeps ENSOPRG00000005747 I 0.826
Tfcp2 Mus musculus ENSMUSG00000009733 I 0.826
ENSLACG00000017694 Latimeria chalumnae ENSLACG00000017694 I 0.821
ENSPFOG00000011621 Poecilia formosa ENSPFOG00000011621 I 0.821
ENSPMAG00000003474 Petromyzon marinus ENSPMAG00000003474 I 0.816
Pvit_12019 Pogona vitticeps Pvit_12019 I 0.816
ENSXMAG00000005202 Xiphophorus maculatus ENSXMAG00000005202 I 0.816
TFCP2 Tursiops truncatus ENSTTRG00000013836 I 0.815
pou6f1 Takifugu rubripes ENSTRUG00000014900 I 0.812
AAI06326 Xenopus laevis AAI06326 I 0.807
ENSGMOG00000007483 Gadus morhua ENSGMOG00000007483 I 0.807
TFCP2L1 Erinaceus europaeus ENSEEUG00000011003 I 0.802
ENSP00000257915 Macaca fascicularis ENSP00000257915 I 0.802
ENSDNOG00000019550 Dasypus novemcinctus ENSDNOG00000019550 I 0.802
ENSLAFG00000030783 Loxodonta africana ENSLAFG00000030783 I 0.802
ENSSTOG00000009123 Ictidomys tridecemlineatus ENSSTOG00000009123 I 0.802
tfcp2 Xenopus tropicalis XB-GENE-485720 I 0.800
ENSPSIG00000015527 Pelodiscus sinensis ENSPSIG00000015527 I 0.798
UBP1 Sus scrofa ENSSSCG00000011235 I 0.797
UBP1 Equus caballus ENSECAG00000018555 I 0.797
Myotis_brandtii_UBP1_10023937 Myotis brandtii Myotis_brandtii_UBP1_10023937 I 0.797
ENSDNOG00000017309 Dasypus novemcinctus ENSDNOG00000017309 I 0.797
Afo_R010616 Aptenodytes forsteri Afo_R010616 I 0.797
UBP1 Felis catus ENSFCAG00000006123 I 0.797
AAP78771 Xenopus laevis AAP78771 I 0.795
TFCP2 Cavia porcellus ENSCPOG00000007923 I 0.792
ENSDNOG00000018905 Dasypus novemcinctus ENSDNOG00000018905 I 0.792
ENSLOCG00000002070 Lepisosteus oculatus ENSLOCG00000002070 I 0.792
ENSAPLG00000012157 Anas platyrhynchos ENSAPLG00000012157 I 0.792
ENSXMAG00000003023 Xiphophorus maculatus ENSXMAG00000003023 I 0.792
ENSP00000283628-D1 Bos grunniens ENSP00000283628-D1 I 0.792
Alligator_sinensis_CCG015050.1 Alligator sinensis Alligator_sinensis_CCG015050.1 I 0.792
TFCP2L1 Myotis lucifugus ENSMLUG00000002967 I 0.792
TFCP2 Pteropus vampyrus ENSPVAG00000014772 I 0.790
tfcp2.L Xenopus laevis XB-GENE-865546 I 0.790
UBP1 Procavia capensis ENSPCAG00000008237 I 0.788
UBP1 Sorex araneus ENSSARG00000008670 I 0.787
Ubp1 Dipodomys ordii ENSDORG00000010133 I 0.787
UBP1 Tursiops truncatus ENSTTRG00000016791 I 0.787
ENSLACG00000000718 Latimeria chalumnae ENSLACG00000000718 I 0.784
ENSPFOG00000008378 Poecilia formosa ENSPFOG00000008378 I 0.783
ENSOARG00000015881 Ovis aries ENSOARG00000015881 I 0.783
ubp1 Danio rerio ENSDARG00000018000 I 0.783
ubp1 Oryzias latipes ENSORLG00000011706 I 0.783
UBP1 Meleagris gallopavo ENSMGAG00000011814 I 0.780
UBP1 Echinops telfairi ENSETEG00000016510 I 0.779
TFCP2L1 Tursiops truncatus ENSTTRG00000003387 I 0.778
ubp1 Tetraodon nigroviridis ENSTNIG00000016974 I 0.778
tfcp2 Tetraodon nigroviridis ENSTNIG00000012528 I 0.778
ubp1 Takifugu rubripes ENSTRUG00000013570 I 0.778
ENSSHAG00000002389 Sarcophilus harrisii ENSSHAG00000002389 I 0.773
ENSPMAG00000006794 Petromyzon marinus ENSPMAG00000006794 I 0.768
UBP1 Homo sapiens ENSG00000153560 D 0.768
ENSPSIG00000003763 Pelodiscus sinensis ENSPSIG00000003763 I 0.766
ENSLOCG00000002718 Lepisosteus oculatus ENSLOCG00000002718 I 0.763
ENSCSAG00000009395 Chlorocebus sabaeus ENSCSAG00000009395 I 0.763
UBP1 Macaca mulatta ENSMMUG00000016917 I 0.763
ENSMPUG00000013008 Mustela putorius furo ENSMPUG00000013008 I 0.763
ENSAMEG00000002341 Ailuropoda melanoleuca ENSAMEG00000002341 I 0.763
UBP1 Oryctolagus cuniculus ENSOCUG00000011063 I 0.763
ENSNLEG00000004651 Nomascus leucogenys ENSNLEG00000004651 I 0.763
UBP1 Myotis lucifugus ENSMLUG00000010827 I 0.763
ENSPPYG00000014030 Pongo abelii ENSPPYG00000014030 I 0.763
UBP1 Callithrix jacchus ENSCJAG00000012030 I 0.763
ENSP00000283629 Macaca fascicularis ENSP00000283629 I 0.763
UBP1 Pteropus vampyrus ENSPVAG00000004158 I 0.763
UBP1 Pan troglodytes ENSPTRG00000014733 I 0.763
UBP1 Cavia porcellus ENSCPOG00000009270 I 0.763
UBP1 Canis familiaris ENSCAFG00000004598 I 0.763
ENSPANG00000003702 Papio anubis ENSPANG00000003702 I 0.758
UBP1 Otolemur garnettii ENSOGAG00000000962 I 0.758
UBP1 Bos taurus ENSBTAG00000003968 I 0.758
UBP1 Ochotona princeps ENSOPRG00000012913 I 0.758
Ubp1 Rattus norvegicus ENSRNOG00000009729 I 0.758
ENSMODG00000002605 Monodelphis domestica ENSMODG00000002605 I 0.754
Ubp1 Mus musculus ENSMUSG00000009741 I 0.751
ENSONIG00000004467 Oreochromis niloticus ENSONIG00000004467 I 0.749
tfcp2l1 Tetraodon nigroviridis ENSTNIG00000017829 N 0.749
Tfcp2l1 Dipodomys ordii ENSDORG00000004265 I 0.746
Alligator_sinensis_CCG001336.1 Alligator sinensis Alligator_sinensis_CCG001336.1 I 0.745
Ogr01415 Ophisaurus gracilis Ogr01415 I 0.744
UBP1 Anolis carolinensis ENSACAG00000013565 I 0.744
UBP1 Ornithorhynchus anatinus ENSOANG00000008309 I 0.744
Ogr17000 Ophisaurus gracilis Ogr17000 I 0.744
Gfo_R001955 Geospiza fortis Gfo_R001955 I 0.739
ENSGALG00000011980 Gallus gallus ENSGALG00000011980 I 0.739
ENSFALG00000004962 Ficedula albicollis ENSFALG00000004962 I 0.739
ENSAPLG00000001472 Anas platyrhynchos ENSAPLG00000001472 I 0.739
Brh_R008147 Buceros rhinoceros Brh_R008147 I 0.739
Afo_R010081 Aptenodytes forsteri Afo_R010081 I 0.739
Aan_R001501 Calypte anna Aan_R001501 I 0.739
Tal_R012945 Tyto alba Tal_R012945 I 0.739
TFCP2 Oryctolagus cuniculus ENSOCUG00000009026 I 0.734
ENSSTOG00000012083 Ictidomys tridecemlineatus ENSSTOG00000012083 I 0.734
tfcp2l1 Takifugu rubripes ENSTRUG00000002438 N 0.734
ENSFALG00000004724 Ficedula albicollis ENSFALG00000004724 I 0.729
ENSONIG00000002320 Oreochromis niloticus ENSONIG00000002320 I 0.729
Alligator_sinensis_CCG020804.1 Alligator sinensis Alligator_sinensis_CCG020804.1 N 0.729
TFCP2L1 Pteropus vampyrus ENSPVAG00000001653 I 0.725
ubp1 Gasterosteus aculeatus ENSGACG00000005520 I 0.720
tfcp2l1 Danio rerio ENSDARG00000029497 N 0.720
ENSGMOG00000010354 Gadus morhua ENSGMOG00000010354 I 0.720
ENSSHAG00000005805 Sarcophilus harrisii ENSSHAG00000005805 I 0.720
ENSACAG00000017482 Anolis carolinensis ENSACAG00000017482 I 0.705
ENSSHAG00000002647 Sarcophilus harrisii ENSSHAG00000002647 I 0.705
Ogr16171 Ophisaurus gracilis Ogr16171 I 0.700
ENSPFOG00000001485 Poecilia formosa ENSPFOG00000001485 N 0.700
ENSPFOG00000014602 Poecilia formosa ENSPFOG00000014602 N 0.700