CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L892_g25006
(
Steinernema scapterisci
)
Grainyhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04516 (CP2)
IPR007604
L892_g25006
T199706_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L892_g25006.t1
Grainyhead
195
418
AHVPQEMTSVIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVVLSYIPDHQKPLQSKTVRSILMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSIAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGANRKMLHENRRDEKRRQT
L892_g25006.t2
Grainyhead
195
418
AHVPQEMTSVIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVVLSYIPDHQKPLQSKTVRSILMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSIAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGANRKMLHENRRDEKRRQT
L892_g25006.t3
Grainyhead
195
418
AHVPQEMTSVIERPERTLSHRDSPVVIAKIHNRLGFQYVLEAPISTQIRKDDDRMTYVNKGQYYNVVLSYIPDHQKPLQSKTVRSILMLAFREDKTYEKEMETWFKWHKEQQNRRQRIIDYDAKNSTGFHGQITEPALNAIEFYWDPTEGPVKLSIAVQCLSTDFSPQKGVKGWPMHLQIDTYDDENAKTPFHRGFCQIKVFCDKGAERKLRDEDKRAQKRKNQ
Links
Other
Grainyhead
family TFs
Other
Steinernema scapterisci
TFs
7 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
L596_g19549
Steinernema carpocapsae
L596_g19549
N
0.919
L889_g11263
Steinernema feltiae
L889_g11263
N
0.877
L893_g6531
Steinernema glaseri
L893_g6531
N
0.825
L898_g1752
Steinernema monticolum
L898_g1752
N
0.810
NBR_0001111401
Nippostrongylus brasiliensis
NBR_0001111401
I
0.788
MhA1_Contig3342.frz3.fgene1
Meloidogyne hapla
MhA1_Contig3342.frz3.fgene1
I
0.764