NBR_0001111401 (Nippostrongylus brasiliensis)
Grainyhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04516 (CP2) IPR007604 NBR_0001111401 T199717_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
grh
M06209_2.00
Drosophila melanogaster
MTKGTTYHVY

RBHRAACMAK
B1H
Zhu et al.(2011)
grh_FlyReg_FBgn0259211
0.788 0.788
grh
M10616_2.00
Drosophila melanogaster
NNDDNBGGTDTHDHVN

NBDHDAHACCVNHHNN
Transfac
Matys et al.(2006)
I$ELF1_01
0.788 0.788
grh
M10617_2.00
Drosophila melanogaster Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
I$GRH_01
0.788 0.788
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NBR_0001111401-mRNA-1 Grainyhead 1 52

Links

Other Grainyhead family TFs
Other Nippostrongylus brasiliensis TFs

85 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BGIOSGA012750 Oryza indica BGIOSGA012750 N 0.000
BRADI1G61110 Brachypodium distachyon BRADI1G61110 N 0.000
F775_05071 Aegilops tauschii F775_05071 N 0.000
GRMZM2G350312 Zea mays GRMZM2G350312 N 0.000
LPERR03G16670 Leersia perrieri LPERR03G16670 N 0.000
MLOC_72614 Hordeum vulgare MLOC_72614 N 0.000
OB03G28630 Oryza brachyantha OB03G28630 N 0.000
OBART03G19370 Oryza barthii OBART03G19370 N 0.000
OGLUM03G19940 Oryza glumaepatula OGLUM03G19940 N 0.000
OMERI03G17430 Oryza meridionalis OMERI03G17430 N 0.000
OMERI03G17460 Oryza meridionalis OMERI03G17460 N 0.000
ONIVA03G20030 Oryza nivara ONIVA03G20030 N 0.000
ORGLA03G0182200 Oryza glaberrima ORGLA03G0182200 N 0.000
ORUFI03G20000 Oryza rufipogon ORUFI03G20000 N 0.000
OS03G0379300 Oryza sativa OS03G0379300 N 0.000
Pavir.Ia03149 Panicum virgatum Pavir.Ia03149 N 0.000
Pavir.J37675 Panicum virgatum Pavir.J37675 N 0.000
Si037016m.g Setaria italica Si037016m.g N 0.000
Traes_2AS_9AEA9BDEA Triticum aestivum Traes_2AS_9AEA9BDEA N 0.000
Traes_2BS_8A40B568C Triticum aestivum Traes_2BS_8A40B568C N 0.000
Traes_2DS_FE62DB7F5 Triticum aestivum Traes_2DS_FE62DB7F5 N 0.000
TRIUR3_24765 Triticum urartu TRIUR3_24765 N 0.000