CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA001121
(
Oryza indica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
BGIOSGA001121
T199849_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA001121-PA
GRAS
86
449
LVHLLMSCAGAIEAGDHALASAQLADSHAALAAVSAASGIGRVAVHFTTALSRRLFPSPVAPPTTDAEHAFLYHHFYEACPYLKFAHFTANQAILEAFHGCDHVHVIDFSLMQGLQWPALIQALALRPGGPPFLRITGIGPPSPTGRDELRDVGLRLADLARSVRVRFSFRGVAANSLDEVRPWMLQIAPGEAVAFNSVLQLHRLLGDPADQAPIDAVLDCVASVRPKIFTVIEQEADHNKTGFLDRFTEALFYYSAVFDSLDAASASGGAGNAMAEAYLQREICDIVCGEGAARRERHEPLSRWRDRLTRAGLSAVPLGSNALRQARMLVGLFSGEGHSVEEADGCLTLGWHGRPLFSASAWE
Links
Other
GRAS
family TFs
Other
Oryza indica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS01G0646300
Oryza sativa
OS01G0646300
N
1.000
ORUFI01G27440
Oryza rufipogon
ORUFI01G27440
N
1.000
ONIVA01G27720
Oryza nivara
ONIVA01G27720
N
0.997
ORGLA01G0197900
Oryza glaberrima
ORGLA01G0197900
N
0.997
OGLUM01G28380
Oryza glumaepatula
OGLUM01G28380
N
0.997
OMERI01G24610
Oryza meridionalis
OMERI01G24610
N
0.997
OBART01G24520
Oryza barthii
OBART01G24520
N
0.994
OPUNC01G24550
Oryza punctata
OPUNC01G24550
N
0.986
OLONG_004760
Oryza longistaminata
OLONG_004760
N
0.983
OB01G33730
Oryza brachyantha
OB01G33730
N
0.978
LPERR01G20990
Leersia perrieri
LPERR01G20990
N
0.949
TRAES3BF178300020CFD_g
Triticum aestivum
TRAES3BF178300020CFD_g
N
0.889
MLOC_73617
Hordeum vulgare
MLOC_73617
N
0.886
Sb03g029470
Sorghum bicolor
Sb03g029470
N
0.840
Si001293m.g
Setaria italica
Si001293m.g
N
0.832
GRMZM2G001426
Zea mays
GRMZM2G001426
N
0.831
BRADI2G45117
Brachypodium distachyon
BRADI2G45117
N
0.824
Pavir.J11985
Panicum virgatum
Pavir.J11985
N
0.823
Pavir.J09720
Panicum virgatum
Pavir.J09720
N
0.813
GRMZM5G826526
Zea mays
GRMZM5G826526
N
0.752