SLR1 (Oryza indica)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 BGIOSGA013420 T199866_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA013420-PA GRAS 241 621

Links

Other GRAS family TFs
Other Oryza indica TFs

62 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.735
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.702
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.887
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.726
Ca_13295 Cicer arietinum Ca_13295 I 0.713
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.731
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.728
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.721
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.729
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.710
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.702
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.717
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.901
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.983
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.710
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.704
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.716
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.716
MDP0000669451 Malus domestica MDP0000669451 I 0.724
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.713
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.715
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.704
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.705
mgf025772m Mimulus guttatus mgf025772m N 0.713
mgf008289m Mimulus guttatus mgf008289m N 0.713
OBART03G31370 Oryza barthii OBART03G31370 N 1.000
OB03G38380 Oryza brachyantha OB03G38380 N 0.978
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 1.000
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.986
OLONG_002563 Oryza longistaminata OLONG_002563 N 0.782
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 1.000
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 1.000
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.986
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.997
SLR1 Oryza sativa OS03G0707600 N 0.997
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.912
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.906
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.723
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.713
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.707
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.715
Pm006304 Prunus mume Pm006304 N 0.706
Pm014329 Prunus mume Pm014329 I 0.721
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.732
28677.m000055 Ricinus communis 28677.m000055 N 0.702
29692.m000540 Ricinus communis 29692.m000540 N 0.715
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.716
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.715
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.704
Si039400m.g Setaria italica Si039400m.g N 0.909
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.702
PGSC0003DMG400015692 Solanum tuberosum PGSC0003DMG400015692 N 0.702
Sb01g010660 Sorghum bicolor Sb01g010660 N 0.884
TCM_019165 Theobroma cacao TCM_019165 N 0.713
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.948
Traes_4BS_2EE4988CD Triticum aestivum Traes_4BS_2EE4988CD N 0.908
Traes_4DS_ADBA6E30A Triticum aestivum Traes_4DS_ADBA6E30A N 0.904
TRIUR3_18790 Triticum urartu TRIUR3_18790 N 0.771
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.707
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.732
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.889
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.900