Bra013973 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra013973 T199978_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RGL2
M02031_2.00 		Arabidopsis thaliana
NGTACGGHN
NDCCGTACN		 PBM
Weirauch et al.(2014)
pTH8681 		0.796 0.796
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra013973.1-P GRAS 156 515

Links

Other GRAS family TFs
Other Brassica rapa TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo9g160170 Brassica oleracea Bo9g160170 I 0.983
RGL3 Arabidopsis lyrata fgenesh2_kg.6__1749__AT5G17490.1 I 0.891
RGL3 Arabidopsis thaliana AT5G17490 I 0.888
Cagra.6170s0019 Capsella grandiflora Cagra.6170s0019 I 0.885
Carubv10003592m.g Capsella rubella Carubv10003592m.g I 0.885
Bostr.26527s0463 Boechera stricta Bostr.26527s0463 I 0.883
Thhalv10015535m.g Eutrema salsugineum Thhalv10015535m.g I 0.874
Carubv10015212m.g Capsella rubella Carubv10015212m.g I 0.791
Thhalv10020431m.g Eutrema salsugineum Thhalv10020431m.g I 0.790
Bostr.19046s0061 Boechera stricta Bostr.19046s0061 I 0.790
Bo5g149920 Brassica oleracea Bo5g149920 I 0.790
Cagra.2098s0043 Capsella grandiflora Cagra.2098s0043 I 0.788
RGL2 Arabidopsis thaliana AT3G03450 D 0.783
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.771
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.704
Pm014329 Prunus mume Pm014329 I 0.701