Bra014251 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra014251 T199979_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra014251.1-P GRAS 56 442

Links

Other GRAS family TFs
Other Brassica rapa TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Bo3g179450 Brassica oleracea Bo3g179450 N 0.984
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.954
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.951
SCL3 Arabidopsis thaliana AT1G50420 N 0.940
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.938
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.935
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.932
Bra018848 Brassica rapa Bra018848 N 0.930
Bo6g022200 Brassica oleracea Bo6g022200 N 0.927
TCM_040833 Theobroma cacao TCM_040833 N 0.775
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.772
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.772
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.770
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.756
Pm012190 Prunus mume Pm012190 N 0.756
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.753
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.753
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.748
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.748
Ca_11133 Cicer arietinum Ca_11133 N 0.740
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.737
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.737
Cla006433 Citrullus lanatus Cla006433 N 0.732
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.729
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.729
30024.m001746 Ricinus communis 30024.m001746 N 0.729
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.729
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.726
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.724
Ca_27441 Cicer arietinum Ca_27441 N 0.724
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.721
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.718
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.718
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.710
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.707
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.705
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.705
TCM_042392 Theobroma cacao TCM_042392 N 0.705
30131.m007244 Ricinus communis 30131.m007244 N 0.702
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.702
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.702
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.702