Bra026077 (Brassica rapa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 Bra026077 T199994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Bra026077.1-P GRAS 1 294

Links

Other GRAS family TFs
Other Brassica rapa TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.777
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.709
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.733
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.726
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.976
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.976
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.726
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.723
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.983
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.719
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.760
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.743
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.747
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.712
PK09018.1 Cannabis sativa PK09018.1 N 0.712
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.979
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.712
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.740
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.716
MDP0000804652 Malus domestica MDP0000804652 N 0.743
MDP0000284679 Malus domestica MDP0000284679 N 0.726
MDP0000205236 Malus domestica MDP0000205236 N 0.726
MDP0000152670 Malus domestica MDP0000152670 N 0.747
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.716
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.712
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.764
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.771
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.709
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.783
Bra036185 Brassica rapa Bra036185 N 0.709
Bra020715 Brassica rapa Bra020715 N 0.716
Bra018860 Brassica rapa Bra018860 N 0.993
Bo9g009260 Brassica oleracea Bo9g009260 N 0.712
Bo7g089080 Brassica oleracea Bo7g089080 N 0.709
Bo6g022330 Brassica oleracea Bo6g022330 N 0.993
Bo5g079990 Brassica oleracea Bo5g079990 N 0.714
PAT1 Arabidopsis thaliana AT5G48150 N 0.726
SCL5 Arabidopsis thaliana AT1G50600 N 0.986
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.723
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.726
27613.m000642 Ricinus communis 27613.m000642 N 0.764
Ca_13855 Cicer arietinum Ca_13855 N 0.729
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.723
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.726
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.705
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.716
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.726
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.740
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.736
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.726
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.712
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.719