SCL1 (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh2_kg.1__2335__AT1G21450.1 T200118_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__2335__AT1G21450.1 GRAS 222 593

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
SCL1 Arabidopsis thaliana AT1G21450 N 0.984
Cagra.1632s0036 Capsella grandiflora Cagra.1632s0036 N 0.976
Carubv10008658m.g Capsella rubella Carubv10008658m.g N 0.970
Bostr.25570s0024 Boechera stricta Bostr.25570s0024 N 0.959
Thhalv10007142m.g Eutrema salsugineum Thhalv10007142m.g N 0.946
Bra017915 Brassica rapa Bra017915 N 0.905
Bo5g034360 Brassica oleracea Bo5g034360 N 0.905
Bo7g059410 Brassica oleracea Bo7g059410 N 0.884
Bra012280 Brassica rapa Bra012280 N 0.846
orange1.1g007853m.g Citrus sinensis orange1.1g007853m.g N 0.791
Ciclev10000671m.g Citrus clementina Ciclev10000671m.g N 0.791
chr1.CM0982.460.nd Lotus japonicus chr1.CM0982.460.nd N 0.789
gene01015-v1.0-hybrid Fragaria vesca gene01015-v1.0-hybrid N 0.780
evm.TU.supercontig_26.96 Carica papaya evm.TU.supercontig_26.96 N 0.780
TCM_035362 Theobroma cacao TCM_035362 N 0.772
Gorai.005G083700 Gossypium raimondii Gorai.005G083700 N 0.772
29648.m001919 Ricinus communis 29648.m001919 N 0.768
Gorai.009G251800 Gossypium raimondii Gorai.009G251800 N 0.767
PRUPE_ppa003310mg Prunus persica PRUPE_ppa003310mg N 0.762
MDP0000727836 Malus domestica MDP0000727836 N 0.759
MDP0000859087 Malus domestica MDP0000859087 N 0.756
Pm022704 Prunus mume Pm022704 N 0.756
cassava26784.m1 Manihot esculenta cassava26784.m1 N 0.751
cassava42388.valid.m1 Manihot esculenta cassava42388.valid.m1 N 0.748
Ca_13101 Cicer arietinum Ca_13101 N 0.747
MTR_3g089055 Medicago truncatula MTR_3g089055 N 0.745
PK29476.1 Cannabis sativa PK29476.1 N 0.745
POPTR_0002s07430 Populus trichocarpa POPTR_0002s07430 N 0.745
MTR_1g029420 Medicago truncatula MTR_1g029420 N 0.743
POPTR_0005s20890 Populus trichocarpa POPTR_0005s20890 N 0.743
SapurV1A.0267s0240 Salix purpurea SapurV1A.0267s0240 N 0.743
SapurV1A.0261s0120 Salix purpurea SapurV1A.0261s0120 N 0.743
GLYMA14G27290 Glycine max GLYMA14G27290 N 0.741
GLYMA13G09220 Glycine max GLYMA13G09220 N 0.741
GLYMA06G12701 Glycine max GLYMA06G12701 N 0.735
GLYMA04G42090 Glycine max GLYMA04G42090 N 0.727
VIT_04s0044g01370 Vitis vinifera VIT_04s0044g01370 N 0.726
Ca_03920 Cicer arietinum Ca_03920 N 0.726
Eucgr.F04276 Eucalyptus grandis Eucgr.F04276 N 0.724
LjSGA_053605.1 Lotus japonicus LjSGA_053605.1 N 0.718
Ca_13102 Cicer arietinum Ca_13102 N 0.718
Lus10029747.g Linum usitatissimum Lus10029747.g N 0.715
Lus10042776.g Linum usitatissimum Lus10042776.g N 0.713
SCL1 Vitis vinifera VIT_18s0001g15270 N 0.710
Aquca_014_00370 Aquilegia coerulea Aquca_014_00370 N 0.710
AMTR_s00186p00018500 Amborella trichopoda AMTR_s00186p00018500 N 0.705
Solyc04g064550.1 Solanum lycopersicum Solyc04g064550.1 N 0.705
PDK_20s1392371g003 Phoenix dactylifera PDK_20s1392371g003 N 0.703
Cucsa.079150 Cucumis sativus Cucsa.079150 N 0.702
PGSC0003DMG400024853 Solanum tuberosum PGSC0003DMG400024853 N 0.702