SCL13 (Arabidopsis lyrata)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 fgenesh2_kg.7__2586__AT4G17230.1 T200132_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.7__2586__AT4G17230.1 GRAS 1 289

Links

Other GRAS family TFs
Other Arabidopsis lyrata TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Thhalv10024887m.g Eutrema salsugineum Thhalv10024887m.g N 0.944
Bra026237 Brassica rapa Bra026237 N 0.909
Bo8g047170 Brassica oleracea Bo8g047170 N 0.899
Ca_20223 Cicer arietinum Ca_20223 N 0.763
Cla014623 Citrullus lanatus Cla014623 N 0.760
GLYMA07G39650 Glycine max GLYMA07G39650 N 0.760
Carubv10004566m.g Capsella rubella Carubv10004566m.g N 0.756
Cagra.3356s0014 Capsella grandiflora Cagra.3356s0014 N 0.756
Bostr.30275s0178 Boechera stricta Bostr.30275s0178 N 0.753
SCL13 Arabidopsis thaliana AT4G17230 N 0.753
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.746
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.742
POPTR_0016s01110 Populus trichocarpa POPTR_0016s01110 N 0.739
MTR_4g133660 Medicago truncatula MTR_4g133660 N 0.735
MDP0000254936 Malus domestica MDP0000254936 N 0.735
SapurV1A.0823s0110 Salix purpurea SapurV1A.0823s0110 N 0.732
27529.m000047 Ricinus communis 27529.m000047 N 0.728
Solyc11g012510.1 Solanum lycopersicum Solyc11g012510.1 N 0.725
SapurV1A.0359s0250 Salix purpurea SapurV1A.0359s0250 N 0.721
PGSC0003DMG400008442 Solanum tuberosum PGSC0003DMG400008442 N 0.721
PGSC0003DMG400023556 Solanum tuberosum PGSC0003DMG400023556 N 0.721
OMERI10G05450 Oryza meridionalis OMERI10G05450 N 0.718
Bo1g052870 Brassica oleracea Bo1g052870 N 0.715
Bra021063 Brassica rapa Bra021063 N 0.707
Solyc04g014830.1 Solanum lycopersicum Solyc04g014830.1 N 0.707
MDP0000152670 Malus domestica MDP0000152670 N 0.700