CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA07G39650
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA07G39650
T200169_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA07G39650.3
GRAS
171
542
LKGVLRVCAQAVSDDDVPTARGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLNCEQPTSKELMSYMHILYQICPYWKFAYISANAVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSIHARGGGLQIVGERLSDFARSCGVPFEFRSAAISGCEVVRGNIEVLPGEALAVSFPYVLHHMPDESVSTENHRDRLLRLVKRLSPKVVTIVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR
GLYMA07G39650.4
GRAS
171
542
LKGVLRVCAQAVSDDDVPTARGWMDNVLGKMVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLNCEQPTSKELMSYMHILYQICPYWKFAYISANAVIEEAMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSIHARGGGLQIVGERLSDFARSCGVPFEFRSAAISGCEVVRGNIEVLPGEALAVSFPYVLHHMPDESVSTENHRDRLLRLVKRLSPKVVTIVEQESNTNTSPFFHRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDIVNMIACEGVERVERHELLGKWRSRLSMAGFKQCQLSSSVMVAIQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA17G01150
Glycine max
GLYMA17G01150
N
0.946
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.848
Ca_20223
Cicer arietinum
Ca_20223
N
0.846
MTR_4g133660
Medicago truncatula
MTR_4g133660
N
0.829
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.802
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.800
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.799
Ca_07887
Cicer arietinum
Ca_07887
N
0.767
SCL13
Arabidopsis lyrata
fgenesh2_kg.7__2586__AT4G17230.1
N
0.760
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.747
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.743
TCM_030393
Theobroma cacao
TCM_030393
N
0.743
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.743
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.740
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.737
Cla014623
Citrullus lanatus
Cla014623
N
0.737
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.732
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.732
Pm012494
Prunus mume
Pm012494
N
0.729
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.726
MDP0000254936
Malus domestica
MDP0000254936
N
0.721
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.718
Solyc11g012510.1
Solanum lycopersicum
Solyc11g012510.1
N
0.702