CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA12G06670
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA12G06670
T200210_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA12G06670.1
GRAS
287
658
LRTLLILCAQAVSSDDHVSANELLKQIKQHASPLGDGTQRLAHCFANALEARLAGTGTQIYTALSHKRTSAADMVKAYQMYISACPFKKLSMIFANHTILQLAKEVETLHIIDFGIRYGFQWPAFIYRLSKQPGGPPKLRITGIELPQPGFRPAERVQETGLRLARYCDRFNVPFEFNAIAQKWETIKIEDLKIKENELLVANAMFRFQNLLDETVVVNSPRDAVLKLIRKANPAIFLHATVNGSYNAPFFVTRFREALFHYSTLFDVLDTNVAREDPMRLMFEREFFGRQVMNIVACEGSERVERPETYKQWQVRNMRAGFKQLPLDKHLINKLRCKLKGVYHSDFMLLEDGNYMLQGWKGRVVYASSCWV
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA11G14750
Glycine max
GLYMA11G14750
N
0.962
Ca_16678
Cicer arietinum
Ca_16678
N
0.859
MTR_4g064160
Medicago truncatula
MTR_4g064160
N
0.841
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.773
Pm000719
Prunus mume
Pm000719
N
0.762
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.757
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.757
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.754
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.741
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.735
TCM_041815
Theobroma cacao
TCM_041815
N
0.735
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.732
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.727
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.725
28650.m000191
Ricinus communis
28650.m000191
N
0.722
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.719
Bra030688
Brassica rapa
Bra030688
N
0.719
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.716
LjSGA_058336.1
Lotus japonicus
LjSGA_058336.1
N
0.708
Gorai.001G111500
Gossypium raimondii
Gorai.001G111500
N
0.705
Lus10040790.g
Linum usitatissimum
Lus10040790.g
N
0.700