CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA17G01150
(
Glycine max
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GLYMA17G01150
T200242_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G01150.1
GRAS
174
545
LKGALKVCAQAVSDDDVPTARGWIDNVLGKLVSVSGDPIQRLGAYLLEGLRARLESSGNLIYKSLKCEQPTSKELMSYMHILYQICPYWKFAYISANAVIQETMANESRIHIIDFQIAQGTQWHLLIQALAHRPGGPPSLRVTGVDDSQSTHARGGGLWIVGERLSDFARSCGVPFEFHSAAISGCEVVRGNIEIRAGEALAVNFPYVLHHMPDESVSTENHRDRLLRLVKSLSPKVVTFVEQESNTNTSPFFQRFVETLDYYTAMFESIDVACPRDDKKRISAEQHCVARDMVNMIACEGVERVERHELFGKWRSRLSMAGFKQCQLSSSVMVATQNLLKEFSQNYRLEHRDGALYLGWMNRHMATSSAWR
Links
Other
GRAS
family TFs
Other
Glycine max
TFs
23 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA07G39650
Glycine max
GLYMA07G39650
N
0.946
chr4.CM0288.500.nc
Lotus japonicus
chr4.CM0288.500.nc
N
0.854
Ca_20223
Cicer arietinum
Ca_20223
N
0.835
MTR_4g133660
Medicago truncatula
MTR_4g133660
N
0.824
chr6.LjT16B20.120.nc
Lotus japonicus
chr6.LjT16B20.120.nc
N
0.808
GLYMA15G12320
Glycine max
GLYMA15G12320
N
0.799
GLYMA09G01440
Glycine max
GLYMA09G01440
N
0.797
Ca_07887
Cicer arietinum
Ca_07887
N
0.764
evm.TU.supercontig_27.254
Carica papaya
evm.TU.supercontig_27.254
N
0.743
TCM_030393
Theobroma cacao
TCM_030393
N
0.740
Gorai.009G184100
Gossypium raimondii
Gorai.009G184100
N
0.737
Cla014623
Citrullus lanatus
Cla014623
N
0.734
Eucgr.D01435
Eucalyptus grandis
Eucgr.D01435
N
0.732
Gorai.010G249400
Gossypium raimondii
Gorai.010G249400
N
0.732
Ciclev10014811m.g
Citrus clementina
Ciclev10014811m.g
N
0.732
orange1.1g008984m.g
Citrus sinensis
orange1.1g008984m.g
N
0.729
PRUPE_ppa003910mg
Prunus persica
PRUPE_ppa003910mg
N
0.721
Pm012494
Prunus mume
Pm012494
N
0.718
Cucsa.044690
Cucumis sativus
Cucsa.044690
N
0.718
SCL13
Vitis vinifera
VIT_00s0463g00020
N
0.713
MDP0000254936
Malus domestica
MDP0000254936
N
0.713
Solyc11g012510.1
Solanum lycopersicum
Solyc11g012510.1
N
0.702
PK04573.1
Cannabis sativa
PK04573.1
N
0.702