CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GRMZM2G013016
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G013016
T200259_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G013016_P01
GRAS
161
537
LVQLLVACAEAVACRDRAQAAALLRELQAGAPVHGTAFQRVASCFVQGLADRLALAHPPALGPASMAFCIPPSCAGRDGGARAEALALAYDLCPYLRFAHFVANASILEAFEGETNVHVLDLGMTLGLDRAHQWRALLDGLAARAGAAARPARVRVTAVGAPADAMRAVGRELLAYAEGLGMCLEFRAVDRSLESLHIDDLGIAADEAVAINSVLELHCVVKESRGALNSVLQTIRKLSPKAFVLVEQDAGHNGPFFLGRFMEALHYYAAVFDALDAALPRYDARRARVEQFHFGAEIRNVVGCEGAARVERHERADQWRRRMSRAGFQSMPIRMAARAREWLEENAGGGGYTVAEEKGCLVLGWKGKPVIAASCWK
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J35085
Panicum virgatum
Pavir.J35085
N
0.974
Sb03g043030
Sorghum bicolor
Sb03g043030
N
0.959
Si000959m.g
Setaria italica
Si000959m.g
N
0.934
BGIOSGA004999
Oryza indica
BGIOSGA004999
N
0.909
OMERI01G37870
Oryza meridionalis
OMERI01G37870
N
0.907
TRAES3BF071100020CFD_g
Triticum aestivum
TRAES3BF071100020CFD_g
N
0.901
TRAES3BF071100040CFD_g
Triticum aestivum
TRAES3BF071100040CFD_g
N
0.879
BRADI2G57940
Brachypodium distachyon
BRADI2G57940
N
0.874
OBART01G40830
Oryza barthii
OBART01G40830
N
0.849
ONIVA01G45890
Oryza nivara
ONIVA01G45890
N
0.805
LPERR01G35370
Leersia perrieri
LPERR01G35370
N
0.802
ORGLA01G0347800
Oryza glaberrima
ORGLA01G0347800
N
0.783
ONIVA01G45910
Oryza nivara
ONIVA01G45910
N
0.719
BGIOSGA005001
Oryza indica
BGIOSGA005001
N
0.719
TRAES3BF071100030CFD_g
Triticum aestivum
TRAES3BF071100030CFD_g
N
0.707