CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GRMZM2G106548
(
Zea mays
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GRMZM2G106548
T200291_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GRMZM2G106548_P01
GRAS
71
440
LLSLLLRCAEAVAMDQLTEARELLPEIAELASPFGSSPERVAAYFGDALCARVLSSYLGAYSPLALRPLAAAQSRRVAVAFQAYNALSPLVKFSHFTANQAILQALDGEDCLHVIDLDIMQGLQWPGLFHILASRPRKPRSLRITGLGASLDVLEATGRRLADFAASLGLPFEFRPIEGKIGHVADAAALLGSRQRRRDDEATVVHWMHHCLYDVTGSDVGTVRLLRSLRPKLITIVEQDLGHSGDFLGRFVEALHYYSALFDALGDGAGAAEEESAERYAVERQLLGAEIRNIVAVGGPKRTGEVRVERWSHELRHAGFRPVSLAGSPAAQARLLLGMYPWKGYTLVEEDACLKLGWKDLSLLTASAWE
Links
Other
GRAS
family TFs
Other
Zea mays
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_2AS_455BD2CA1
Triticum aestivum
Traes_2AS_455BD2CA1
N
0.939
OS07G0567700
Oryza sativa
OS07G0567700
N
0.938
OB07G24850
Oryza brachyantha
OB07G24850
N
0.938
Si032551m.g
Setaria italica
Si032551m.g
N
0.928
Pavir.Bb03100
Panicum virgatum
Pavir.Bb03100
N
0.920
Sb02g036680
Sorghum bicolor
Sb02g036680
N
0.918
Pavir.Ba00637
Panicum virgatum
Pavir.Ba00637
N
0.913
OPUNC07G18000
Oryza punctata
OPUNC07G18000
N
0.901
ORGLA07G0244600
Oryza glaberrima
ORGLA07G0244600
N
0.901
ORUFI07G19860
Oryza rufipogon
ORUFI07G19860
N
0.901
OPUNC07G17970
Oryza punctata
OPUNC07G17970
N
0.901
BGIOSGA025964
Oryza indica
BGIOSGA025964
N
0.901
ONIVA07G17430
Oryza nivara
ONIVA07G17430
N
0.901
OGLUM07G18870
Oryza glumaepatula
OGLUM07G18870
N
0.901
OMERI07G15800
Oryza meridionalis
OMERI07G15800
N
0.898
OBART07G19080
Oryza barthii
OBART07G19080
N
0.881
LPERR07G16410
Leersia perrieri
LPERR07G16410
N
0.870
BRADI1G24310
Brachypodium distachyon
BRADI1G24310
N
0.847
Traes_2BS_015167E00
Triticum aestivum
Traes_2BS_015167E00
N
0.845
MLOC_62589
Hordeum vulgare
MLOC_62589
N
0.838
OLONG_002258
Oryza longistaminata
OLONG_002258
N
0.785
Pm014866
Prunus mume
Pm014866
N
0.740
PRUPE_ppa005742mg
Prunus persica
PRUPE_ppa005742mg
N
0.740
Eucgr.A00903
Eucalyptus grandis
Eucgr.A00903
N
0.738
evm.TU.supercontig_8.295
Carica papaya
evm.TU.supercontig_8.295
N
0.731
MDP0000287321
Malus domestica
MDP0000287321
N
0.729
VIT_03s0017g01660
Vitis vinifera
VIT_03s0017g01660
N
0.727
POPTR_0016s02030
Populus trichocarpa
POPTR_0016s02030
N
0.727
gene24339-v1.0-hybrid
Fragaria vesca
gene24339-v1.0-hybrid
N
0.727
SapurV1A.0295s0450
Salix purpurea
SapurV1A.0295s0450
N
0.724
PK21090.1
Cannabis sativa
PK21090.1
N
0.724
cassava29451.valid.m1
Manihot esculenta
cassava29451.valid.m1
N
0.721
POPTR_0006s02220
Populus trichocarpa
POPTR_0006s02220
N
0.721
TCM_002021
Theobroma cacao
TCM_002021
N
0.721
LPERR11G01220
Leersia perrieri
LPERR11G01220
N
0.719
29872.m000537
Ricinus communis
29872.m000537
N
0.718
chr3.CM0460.360.nd
Lotus japonicus
chr3.CM0460.360.nd
N
0.718
MDP0000289554
Malus domestica
MDP0000289554
N
0.713
MDP0000269044
Malus domestica
MDP0000269044
N
0.713
Cucsa.180010
Cucumis sativus
Cucsa.180010
N
0.707
SapurV1A.0154s0180
Salix purpurea
SapurV1A.0154s0180
N
0.707
Cla005525
Citrullus lanatus
Cla005525
N
0.707
Ciclev10011732m.g
Citrus clementina
Ciclev10011732m.g
N
0.704
orange1.1g013903m.g
Citrus sinensis
orange1.1g013903m.g
N
0.701
Gorai.004G063200
Gossypium raimondii
Gorai.004G063200
N
0.701