CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GSMUA_Achr6G21350_001
(
Musa acuminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
GSMUA_Achr6G21350_001
T200385_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GSMUA_Achr6P21350_001
GRAS
29
400
AAELLRECARAISEKDSGKIHRLLWMLNELASPYGDCEQKLASYFLQALFCKATESGERCYKTSLSVAEMSHSFESTRKVILQFQEVSPWTTFGHAASNGAILEALEGEAKLHIIDISNTYCTQWPTLLEALATRNDDSPHLRLTVVATAGVGGFVMDEIGQRMGRFARLMGVPFEFHVIRDLSRLDELREEELGLREGEAVAVNCIGALRRVGVEQRQAFIRMLRTLRPRVVTVVEEEADFTSCSGEFAVCFDECLRFYTTYLETLEESFPPTSNERLALERECSRSILRVLACDGDRVGDCERREKGSQWCRRLIEAFSSNSFSDDVVDDLKALLKRYRAGWSLMPAEGDASGLYLTWKQQPVVWACAWK
Links
Other
GRAS
family TFs
Other
Musa acuminata
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GSMUA_Achr9G02380_001
Musa acuminata
GSMUA_Achr9G02380_001
N
0.819
SapurV1A.0865s0070
Salix purpurea
SapurV1A.0865s0070
N
0.795
PK11022.1
Cannabis sativa
PK11022.1
N
0.760
TCM_019978
Theobroma cacao
TCM_019978
N
0.747
VIT_00s0226g00070
Vitis vinifera
VIT_00s0226g00070
N
0.742
Ciclev10020072m.g
Citrus clementina
Ciclev10020072m.g
N
0.737
Pm007259
Prunus mume
Pm007259
N
0.736
PRUPE_ppa1027119mg
Prunus persica
PRUPE_ppa1027119mg
N
0.736
cassava11920.valid.m1
Manihot esculenta
cassava11920.valid.m1
N
0.731
Gorai.011G140100
Gossypium raimondii
Gorai.011G140100
N
0.728
POPTR_0007s01650
Populus trichocarpa
POPTR_0007s01650
N
0.728
Gorai.011G140300
Gossypium raimondii
Gorai.011G140300
N
0.725
SapurV1A.1357s0040
Salix purpurea
SapurV1A.1357s0040
N
0.723
SapurV1A.1272s0060
Salix purpurea
SapurV1A.1272s0060
N
0.723
SapurV1A.0791s0060
Salix purpurea
SapurV1A.0791s0060
N
0.723
POPTR_0017s05450
Populus trichocarpa
POPTR_0017s05450
N
0.723
GLYMA13G42100
Glycine max
GLYMA13G42100
N
0.722
GLYMA15G03290
Glycine max
GLYMA15G03290
N
0.719
SapurV1A.0485s0200
Salix purpurea
SapurV1A.0485s0200
N
0.711
Eucgr.A00109
Eucalyptus grandis
Eucgr.A00109
N
0.710
GSMUA_Achr10G16410_001
Musa acuminata
GSMUA_Achr10G16410_001
N
0.703