CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_57243
(
Hordeum vulgare
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MLOC_57243
T200487_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_57243.1
GRAS
2
313
MVALQVVRIVDLSCSTSHPWQWLKILHDFHGRPGGPPELRLTVVHEDIEFLDNMQALLCKQAANLKLFFHFDKVIGKLETLDFSNLREILKINFGEAVVISCALQMHRLLAVDDSVTRDGIAQLQQMANMARLKQMACPARSPASTLNYPQTPSPQRQIPRLLVSFLSAIRALEPKIIVMMEQDADHNTPLFHDRFTETVHYYAALFDSLNAVGAANPQRARVERVLLGEEIKNILVCEGVQRHERHEKLSQWEMHMQRCQVDHVPLSFEAIREGKERLMSYGLRQCKCDEGNADLLLCWGATRLYSISAWR
MLOC_57243.2
GRAS
18
433
LGPALYECMAHVIEGSFDKTDRSLRKIRKLASLVDGPLQRMSMIIADSLARRLLCPIQGFAAALIDPSRYLEQSCLRAARENFASISPYLSTGFVTINRAMLEQVQDQKVVRIVDLSCSTSHPWQWLKILHDFHGRPGGPPELRLTVVHEDIEFLDNMQALLCKQAANLKLFFHFDKVIGKLETLDFSNLREILKINFGEAVVISCALQMHRLLAVDDSVTRDGIAQLQQMANMARLKQMACPARSPASTLNYPQTPSPQRQIPRLLVSFLSAIRALEPKIIVMMEQDADHNTPLFHDRFTETVHYYAALFDSLNAVGAANPQRARVERVLLGEEIKNILVCEGVQRHERHEKLSQWEMHMQRCQVDHVPLSFEAIREGKERLMSYGLRQCKCDEGNADLLLCWGATRLYSISAWR
MLOC_57243.3
GRAS
1
259
MQALLCKQAANLKLFFHFDKVIGKLETLDFSNLREILKINFGEAVVISCALQMHRLLAVDDSVTRDGIAQLQQMANMARLKQMACPARSPASTLNYPQTPSPQRQIPRLLVSFLSAIRALEPKIIVMMEQDADHNTPLFHDRFTETVHYYAALFDSLNAVGAANPQRARVERVLLGEEIKNILVCEGVQRHERHEKLSQWEMHMQRCQVDHVPLSFEAIREGKERLMSYGLRQCKCDEGNADLLLCWGATRLYSISAWR
Links
Other
GRAS
family TFs
Other
Hordeum vulgare
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_4AL_0A3D7BB7F
Triticum aestivum
Traes_4AL_0A3D7BB7F
N
0.944
TRIUR3_23300
Triticum urartu
TRIUR3_23300
N
0.939
Traes_4DS_5644BB36D
Triticum aestivum
Traes_4DS_5644BB36D
N
0.915
F775_08094
Aegilops tauschii
F775_08094
N
0.915
BRADI4G26520
Brachypodium distachyon
BRADI4G26520
N
0.745