CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MLOC_6971
(
Hordeum vulgare
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MLOC_6971
T200495_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MLOC_6971.1
GRAS
182
552
PKQLLFDCATALAEYNVDEAQAIITDLRQMVSIQGDPSHRIAAYLVEGLAARIVASGTGIYKALTCKDPPTLYQLSAMQILFEICPCYRFGFMAANYAILEACKGEQRMHIIDFDINQGSQYITLMQFMKDDANKPHHLRITGVDDHETVQRTVGGLKVIGQRLEQLAEDCGISFEFRAVGADIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYSALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFAPCPFSSNVIGGIRSLLSSYCDRYKFEEDHGGLHFGWGEKTLIVASAWQ
MLOC_6971.2
GRAS
182
552
PKQLLFDCATALAEYNVDEAQAIITDLRQMVSIQGDPSHRIAAYLVEGLAARIVASGTGIYKALTCKDPPTLYQLSAMQILFEICPCYRFGFMAANYAILEACKGEQRMHIIDFDINQGSQYITLMQFMKDDANKPHHLRITGVDDHETVQRTVGGLKVIGQRLEQLAEDCGISFEFRAVGADIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYSALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFAPCPFSSNVIGGIRSLLSSYCDRYKFEEDHGGLHFGWGEKTLIVASAWQ
Links
Other
GRAS
family TFs
Other
Hordeum vulgare
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Traes_3DL_BF7D83705
Triticum aestivum
Traes_3DL_BF7D83705
N
1.000
Traes_3AL_6E16C8167
Triticum aestivum
Traes_3AL_6E16C8167
N
0.992
F775_25916
Aegilops tauschii
F775_25916
N
0.992
TRIUR3_26381
Triticum urartu
TRIUR3_26381
N
0.986
TRAES3BF021600230CFD_g
Triticum aestivum
TRAES3BF021600230CFD_g
N
0.986
BRADI2G56910
Brachypodium distachyon
BRADI2G56910
N
0.957
ONIVA01G44280
Oryza nivara
ONIVA01G44280
N
0.940
OMERI01G36330
Oryza meridionalis
OMERI01G36330
N
0.938
ORGLA01G0333300
Oryza glaberrima
ORGLA01G0333300
N
0.938
ORUFI01G42800
Oryza rufipogon
ORUFI01G42800
N
0.938
OPUNC01G38160
Oryza punctata
OPUNC01G38160
N
0.938
OBART01G39420
Oryza barthii
OBART01G39420
N
0.938
OGLUM01G43650
Oryza glumaepatula
OGLUM01G43650
N
0.938
OS01G0881500
Oryza sativa
OS01G0881500
N
0.935
OLONG_003002
Oryza longistaminata
OLONG_003002
N
0.935
LPERR01G33950
Leersia perrieri
LPERR01G33950
N
0.927
OB01G48180
Oryza brachyantha
OB01G48180
N
0.927
BGIOSGA000383
Oryza indica
BGIOSGA000383
N
0.925
Si000832m.g
Setaria italica
Si000832m.g
N
0.913
Pavir.J20385
Panicum virgatum
Pavir.J20385
N
0.911
Sb03g041760
Sorghum bicolor
Sb03g041760
N
0.908
Pavir.Ea03635
Panicum virgatum
Pavir.Ea03635
N
0.905
Pavir.J36240
Panicum virgatum
Pavir.J36240
N
0.818
Sb09g020850
Sorghum bicolor
Sb09g020850
N
0.816
Si021635m.g
Setaria italica
Si021635m.g
N
0.813
Pavir.J01797
Panicum virgatum
Pavir.J01797
N
0.810
GRMZM2G153333
Zea mays
GRMZM2G153333
N
0.789
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.767
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.732
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.726
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.718
TCM_035362
Theobroma cacao
TCM_035362
N
0.705
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.702
MDP0000859087
Malus domestica
MDP0000859087
N
0.702
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.700