CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_1g096030
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_1g096030
T200512_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES62244
GRAS
77
459
LIHLLLTTATSVDENNLDSSLENLTDLYQTVSLTGDSVQRVVAYFTDGLTAKLLTKKSPFYEMLMEEPTIDEEFLAFTDLYRVSPYFQFAHFTANQAILEAFEKEEEKNNRSIHVIDFDASYGFQWPSLIQSLSEKATSGNRISFRLTGFGKNLKELQETESRLVSFSKGFGNIVFEFQGLLRGSRVINLRKKKNETVAVNLVSYLNKMSCLLKITDTLGFVHSLNPSIVVIVEQEGSKNPSRTFLSRFTDTLHYFAAMFDSLDDCLPLESIERLRIEKKVFGKEIKSMLNNYDDVEGGVDCAKYEKMETWKSRMENNGFVGMKMSSKCLIQAKLLLKMRTHYCPLQFEEEGGGGFRVSERDDGRAISLGWQNRFLLTVSAWQ
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_04298
Cicer arietinum
Ca_04298
N
0.882
chr5.LjT08L18.130.nd
Lotus japonicus
chr5.LjT08L18.130.nd
N
0.877
GLYMA10G35920
Glycine max
GLYMA10G35920
N
0.860
GLYMA20G31680
Glycine max
GLYMA20G31680
N
0.854
GLYMA16G27310
Glycine max
GLYMA16G27310
N
0.798
GLYMA02G08241
Glycine max
GLYMA02G08241
N
0.777
cassava27916.m1
Manihot esculenta
cassava27916.m1
N
0.745
POPTR_0013s11930
Populus trichocarpa
POPTR_0013s11930
N
0.734
Ciclev10003213m.g
Citrus clementina
Ciclev10003213m.g
N
0.734
orange1.1g041748m.g
Citrus sinensis
orange1.1g041748m.g
N
0.728
POPTR_0019s11540
Populus trichocarpa
POPTR_0019s11540
N
0.728
Gorai.009G289600
Gossypium raimondii
Gorai.009G289600
N
0.719
Eucgr.F02630
Eucalyptus grandis
Eucgr.F02630
N
0.714
TCM_036707
Theobroma cacao
TCM_036707
N
0.714
MDP0000203826
Malus domestica
MDP0000203826
N
0.713
PRUPE_ppa017519mg
Prunus persica
PRUPE_ppa017519mg
N
0.711
SapurV1A.0179s0200
Salix purpurea
SapurV1A.0179s0200
N
0.709
29728.m000844
Ricinus communis
29728.m000844
N
0.709
cassava25355.m1
Manihot esculenta
cassava25355.m1
N
0.709
Pm022208
Prunus mume
Pm022208
N
0.706
SapurV1A.2874s0010
Salix purpurea
SapurV1A.2874s0010
N
0.706