CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MTR_4g064160
(
Medicago truncatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
MTR_4g064160
T200543_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AES88867
GRAS
313
684
LRTMLVLCAQYVSSDDRANANELLRQIRQYSSPLGDGSQRLAHCFANALEARMAGTGTQIYTALYSKRNSAADMVKAYQMYISACPFKKLAIIFANHTILNLAKEVETLHIVDFGIRYGFQWPALIYRLSKRPGGPPKLRLTGIELPQPGFRPAERVQETGLRLARYCERFNVPFEFNAIAQKWETIKVEDLKIKKNELLVVNSVCRLKNLLDETVVLNSPRDAVLKLIRDTNPNIFIHTTVNGSYNAPFFATRFKEALFNYSTMFDVLDINVAREDQTRLMFEKEFWGREVMNIIACEGSQRVERPETYRKWQVRNTRAGFRHLPLDKHLINKLRCKLKDVYHSDFMLVEDGNCMLQGWKGRIIYASSCWV
Links
Other
GRAS
family TFs
Other
Medicago truncatula
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ca_16678
Cicer arietinum
Ca_16678
N
0.903
GLYMA12G06670
Glycine max
GLYMA12G06670
N
0.841
GLYMA11G14750
Glycine max
GLYMA11G14750
N
0.824
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.741
Pm000719
Prunus mume
Pm000719
N
0.732
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.727
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.724
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.724
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.722
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.719
LjSGA_058336.1
Lotus japonicus
LjSGA_058336.1
N
0.716
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.714
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.714
TCM_041815
Theobroma cacao
TCM_041815
N
0.711
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.711
28650.m000191
Ricinus communis
28650.m000191
N
0.705
Bra030688
Brassica rapa
Bra030688
N
0.705
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.703
evm.TU.supercontig_81.124
Carica papaya
evm.TU.supercontig_81.124
N
0.700