CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM05G21920
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM05G21920
T200709_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM05G21920.1
GRAS
138
511
MIALLMECAAAMSVGNLAGANGALLELSQMASPYAPSCGERLVAYFARAMAARLVGSWVGVAAPLAPPPPPCAAAINAAFRALYNVAPFARLAYLACNQAILEAFHGKRLVHIVDLDVVPGGALQWLSLLPALAARPGGPPVIRVTGFGMSASVLHDTGNQLAGLARKLCMSFEFYPVAKRPGDADAVADMPGRRPGEAVAVHWLRHAMYDAAGDDGAAMRLVRWLEPAAVTLVEQERAHGAGGGHGRFLDRFVSALHHYSAVFDAMGASRPDGEDASRHLAEHGVLGREIANVLAVGGPARSNGRERPGGSWREVLARHGFVHAAGGGGGGGRAQLVAGACPGGLGYTVAGDHDGTVRLGWKGTPLYAVSAWA
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORGLA05G0180800
Oryza glaberrima
ORGLA05G0180800
N
0.972
ONIVA05G21490
Oryza nivara
ONIVA05G21490
N
0.947
OS05G0485400
Oryza sativa
OS05G0485400
N
0.939
OPUNC05G18380
Oryza punctata
OPUNC05G18380
N
0.939
OMERI05G18690
Oryza meridionalis
OMERI05G18690
N
0.936
BGIOSGA020074
Oryza indica
BGIOSGA020074
N
0.931
ORUFI05G21990
Oryza rufipogon
ORUFI05G21990
N
0.931
OB05G28200
Oryza brachyantha
OB05G28200
N
0.864
MLOC_77110
Hordeum vulgare
MLOC_77110
N
0.798
Pavir.J13985
Panicum virgatum
Pavir.J13985
N
0.763
Sb09g023750
Sorghum bicolor
Sb09g023750
N
0.754
Si021890m.g
Setaria italica
Si021890m.g
N
0.746
Pavir.J06020
Panicum virgatum
Pavir.J06020
N
0.740
LPERR05G16610
Leersia perrieri
LPERR05G16610
N
0.735
GRMZM2G037286
Zea mays
GRMZM2G037286
N
0.718