CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G02990
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM12G02990
T200739_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G02990.1
GRAS
34
483
APLECAAHVETGPMEKATRCLARATGLAAAAAGDGPQKRLAEAMVDCLARRLLRPVQAITDALIDPSVYLDRRSVRAARRGFFELSPFPKVAFVVGNRAIVEAVENESLVHVVGMSGPFTQPCQWIQLLHELRRRPEGPPRVVRLTVVHDDGELLAKMAEVLSDEAEELDMEFQFHGVVGQLEDLDFGNLRDVLEIKSGEALVVSCTLQLHRLLSADDDAMYSSRSAHLNQMASIAQLQQMAVSSCPPSTGGGGSVQYKDDDDDPYRSPATPLTFVSPPASTPHLQMPAALANFLSAVRALSPKIVVVAEQDADHNGVSFRKRFCEALHHYAAVFDSLDDAAAATTSAASHLWSPDERAQVERVVVGEEIKGVLLRDGAHRRERHDRLRQWAARMEMAGFTGVPLSYAAIRKGNDMVRRCGLRRCENRECGGCLLLCWSSRPLYSISAWR
OGLUM12G02990.1
GRAS
625
935
RDVLVVHIVDLSCSAAHPWQWLKLLDDFHGRPGGAPELYLTVLHDDNDFLAEMQSLLSKKAESLEVSFRFISVIGRLETLDFSNLRSTFQIKFGVAVAISCALQMHRLLLVDDNLSSTSIAQLQKMANFTQPKQMASSVCSPASTLNYLQTPSPRTPKLLARLLSAIRALKPNIMVIMEQDADHNALLFRDRFNEVLNYYAALFDCFHAVAAANPGRTDERLRVERMILREEIKNILVCEGVHRHERHERLDQWAMHMEESGFHNVQLSFSAIREGKENLLSFGLKNCQNKEDRGCLLLSWGSTNLYSISL
OGLUM12G02990.1
GRAS
986
1198
LIGLLYQCAAEVSAGSFDRANLCLEHITQLASLDAPHALQRLAAVFADALARKLLNLIPGLSRALLSSANSADAHLVPVARRHMFDVLPFLKLAYLTTNHAILEAMEGERFVHVVDFSGPAANPVQWIALFHAFRGRREGPPHLRITAVHDSKEFLANMAAVLSKEAEAFDIAFQFXSHAAGLRGRMRKYDFRMRLCRPHAKIVIFADLLAHA
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
3 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ORUFI11G02550
Oryza rufipogon
ORUFI11G02550
N
0.822
ONIVA11G02940
Oryza nivara
ONIVA11G02940
N
0.786
ORUFI12G02660
Oryza rufipogon
ORUFI12G02660
N
0.742