CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM12G04490
(
Oryza glumaepatula
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OGLUM12G04490
T200740_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM12G04490.1
GRAS
173
560
AGDLLLAGAMAVDAGDAVHASAIMSRLDDLLADIAGRRSCEATSPVDHLAYYFARGLKLRISGAATPASSPPPPAANWSSPAYRMLQELTPFVKFAHFTANQAILEATADDLDVHVIDFNVGEGVQWSSLMSDLAAAGRHRSSKPPLFHLTDVITSGAGTPRTADARRWLSEFAESLHLPFRYTSLHVHDGDDDDELHHELAMICNGSSSPPVILTCDDTTTTTNTPLRSRLKLILLGTITILQPKLVILIEDELSRISKNPPSPSLAAPPPFPEFFSDAVAHFTAVMESTASCLVSYDDEAWLSLRRVGEEVVGPRVEDAVGRYGSLAGGAQMMEGLRAREVSGFSVAQGKMLAGLFGGGFGVVHQEKGRLALCWKSRPLISVSLWC
Links
Other
GRAS
family TFs
Other
Oryza glumaepatula
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ONIVA12G03460
Oryza nivara
ONIVA12G03460
N
0.992
OBART12G03770
Oryza barthii
OBART12G03770
N
0.992
BGIOSGA037038
Oryza indica
BGIOSGA037038
N
0.903
OMERI12G02040
Oryza meridionalis
OMERI12G02040
N
0.819