CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OLONG_003058
(
Oryza longistaminata
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OLONG_003058
T200748_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OLONG_003058-R1
GRAS
253
623
LSVLLIQCAQAIASNNHPFASELLRKIRHHALPDGDGSQRLANCFADGLEARLAGTGSQMYEKLMAKQTSTRDMLKAYHLYFVACPFEMVTYYFSNKTIIDALEGKTTLHIVDFGIVFGFQWPCLIQRLAKREGGPPKLRITGVDVPQPGFRPRERIEETGKRLAEYANMFNVPFQYHGIASRWETICIEDLSIDKDEVLIINCMSRMRKLGDETENIDSARDRVLHMMKRMNPQVFILGVVNGLYSSPFFLTRFREVLFHYSSLFDMLDNNVPRNHEARILVEKDLFGNDALNAVACEGAERIERPESYKQWQMRILKAGFKQRPVNQAILNRSVHYKELYHEDFVIDEDSGWLLQGWKGRIIQALSTWK
Links
Other
GRAS
family TFs
Other
Oryza longistaminata
TFs
8 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA018951
Oryza indica
BGIOSGA018951
N
0.992
Sb09g001140
Sorghum bicolor
Sb09g001140
N
0.753
GRMZM2G346706
Zea mays
GRMZM2G346706
N
0.729
Pavir.Ca00616
Panicum virgatum
Pavir.Ca00616
N
0.710
Pavir.J13192
Panicum virgatum
Pavir.J13192
N
0.709
Pavir.J19106
Panicum virgatum
Pavir.J19106
N
0.708
Si024734m.g
Setaria italica
Si024734m.g
N
0.708
Sb01g015760
Sorghum bicolor
Sb01g015760
N
0.707