CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI01G36330
(
Oryza meridionalis
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
OMERI01G36330
T200784_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI01G36330.1
GRAS
183
550
PKQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGVSFEFRAVGANIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFGWGEKTLIWKA
OMERI01G36330.2
GRAS
183
553
PKQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGVSFEFRAVGANIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFGWGEKTLIVSSAWQ
OMERI01G36330.3
GRAS
183
553
PKQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGVSFEFRAVGANIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFGWGEKTLIVSSAWQ
OMERI01G36330.4
GRAS
183
553
PKQLLFDCATALSDYNVDEAQAIITDLRQMVSIQGDPSQRIAAYLVEGLAARIVASGKGIYKALSCKEPPTLYQLSAMQILFEICPCFRFGFMAANYAILEACKGEDRVHIIDFDINQGSQYITLIQFLKNNANKPRHLRITGVDDPETVQRTVGGLKVIGQRLEKLAEDCGVSFEFRAVGANIGDVTPAMLDCRPGEALVVNFAFQLHHLPDESVSIMNERDQLLRMVKGLQPKLVTLVEQDANTNTAPFQTRFREVYDYYAALFDSLDATLPRESPDRMNVERQCLAREIVNILACEGPDRVERYEVAGKWRARMTMAGFTPCPFSSNVISGIRSLLKSYCDRYKFEEDHGGLHFGWGEKTLIVSSAWQ
Links
Other
GRAS
family TFs
Other
Oryza meridionalis
TFs
49 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OBART01G39420
Oryza barthii
OBART01G39420
N
1.000
ORGLA01G0333300
Oryza glaberrima
ORGLA01G0333300
N
1.000
OGLUM01G43650
Oryza glumaepatula
OGLUM01G43650
N
1.000
ONIVA01G44280
Oryza nivara
ONIVA01G44280
N
0.997
OLONG_003002
Oryza longistaminata
OLONG_003002
N
0.997
ORUFI01G42800
Oryza rufipogon
ORUFI01G42800
N
0.995
OPUNC01G38160
Oryza punctata
OPUNC01G38160
N
0.992
OS01G0881500
Oryza sativa
OS01G0881500
N
0.992
LPERR01G33950
Leersia perrieri
LPERR01G33950
N
0.970
OB01G48180
Oryza brachyantha
OB01G48180
N
0.965
F775_25916
Aegilops tauschii
F775_25916
N
0.943
Si000832m.g
Setaria italica
Si000832m.g
N
0.943
Traes_3AL_6E16C8167
Triticum aestivum
Traes_3AL_6E16C8167
N
0.943
BRADI2G56910
Brachypodium distachyon
BRADI2G56910
N
0.940
TRIUR3_26381
Triticum urartu
TRIUR3_26381
N
0.940
Sb03g041760
Sorghum bicolor
Sb03g041760
N
0.938
TRAES3BF021600230CFD_g
Triticum aestivum
TRAES3BF021600230CFD_g
N
0.938
Pavir.J20385
Panicum virgatum
Pavir.J20385
N
0.938
MLOC_6971
Hordeum vulgare
MLOC_6971
N
0.938
Pavir.Ea03635
Panicum virgatum
Pavir.Ea03635
N
0.932
Traes_3DL_BF7D83705
Triticum aestivum
Traes_3DL_BF7D83705
N
0.890
Pavir.J36240
Panicum virgatum
Pavir.J36240
N
0.859
Si021635m.g
Setaria italica
Si021635m.g
N
0.854
Sb09g020850
Sorghum bicolor
Sb09g020850
N
0.854
Pavir.J01797
Panicum virgatum
Pavir.J01797
N
0.846
GRMZM2G153333
Zea mays
GRMZM2G153333
N
0.832
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
0.753
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
0.748
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
0.744
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
0.743
evm.TU.supercontig_26.96
Carica papaya
evm.TU.supercontig_26.96
N
0.740
MDP0000859087
Malus domestica
MDP0000859087
N
0.726
TCM_035362
Theobroma cacao
TCM_035362
N
0.724
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
0.721
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
0.721
Gorai.009G251800
Gossypium raimondii
Gorai.009G251800
N
0.718
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
0.718
MTR_1g029420
Medicago truncatula
MTR_1g029420
N
0.713
VIT_04s0044g01370
Vitis vinifera
VIT_04s0044g01370
N
0.713
MDP0000727836
Malus domestica
MDP0000727836
N
0.713
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
0.713
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
0.710
PK29476.1
Cannabis sativa
PK29476.1
N
0.707
Pm022704
Prunus mume
Pm022704
N
0.707
PRUPE_ppa003310mg
Prunus persica
PRUPE_ppa003310mg
N
0.707
POPTR_0002s07430
Populus trichocarpa
POPTR_0002s07430
N
0.705
gene01015-v1.0-hybrid
Fragaria vesca
gene01015-v1.0-hybrid
N
0.705
cassava42388.valid.m1
Manihot esculenta
cassava42388.valid.m1
N
0.702