CIS-BP Database: Catalog of Inferred Sequence Binding Preferences - Update
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ORGLA06G0016600
(
Oryza glaberrima
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORGLA06G0016600
T200963_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORGLA06G0016600.1
GRAS
217
589
LVRALTACADSLSAGNHEAANYYLARLGEMASPAGPTPMHRVAAYFTEALALRVVRMWPHMFDIGPPRELTGDAFGGGDDDAMALRILNAITPIPRFLHFTLNERLLREFEGHERVHVIDFDIKQGLQWPGLLQSLAARAVPPAHVRITGVGESRQELQETGARLARVAAALGLAFEFHPVVDRLEDVRLWMLHVKRGECVAVNCVLAMHRLLRDDAALTDFLGLARSTGATILLLGEHEGGGLNSGRWEARFARALRYYAAAFDAVDAAGLPEASPARAKAEEMFAREIRNAVAFEGPERFERHESFAGWRRRMEDGGGFKNAGIGEREAMQGRMIARMFGPDKYTVQAHGGGEALTLRWLDQPLYTVTAWT
Links
Other
GRAS
family TFs
Other
Oryza glaberrima
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OGLUM06G01600
Oryza glumaepatula
OGLUM06G01600
N
0.995
BGIOSGA022020
Oryza indica
BGIOSGA022020
N
0.995
ORUFI06G01590
Oryza rufipogon
ORUFI06G01590
N
0.995
DLT
Oryza sativa
OS06G0127800
N
0.995
OBART06G01600
Oryza barthii
OBART06G01600
N
0.984
ONIVA06G01910
Oryza nivara
ONIVA06G01910
N
0.968
OPUNC06G01470
Oryza punctata
OPUNC06G01470
N
0.948
Si008220m.g
Setaria italica
Si008220m.g
N
0.855
Sb10g001690
Sorghum bicolor
Sb10g001690
N
0.844
Pavir.Da02353
Panicum virgatum
Pavir.Da02353
N
0.829
Pavir.J20271
Panicum virgatum
Pavir.J20271
N
0.826
AC234164.1_FG004
Zea mays
AC234164.1_FG004
N
0.824
LPERR06G01410
Leersia perrieri
LPERR06G01410
N
0.808
Pavir.J07013
Panicum virgatum
Pavir.J07013
N
0.798
ORUFI03G24530
Oryza rufipogon
ORUFI03G24530
N
0.784
BRADI1G49630
Brachypodium distachyon
BRADI1G49630
N
0.767
Traes_4AL_FB3CE240C
Triticum aestivum
Traes_4AL_FB3CE240C
N
0.758
OGLUM04G13920
Oryza glumaepatula
OGLUM04G13920
N
0.753
BGIOSGA013002
Oryza indica
BGIOSGA013002
N
0.753
ORGLA03G0222700
Oryza glaberrima
ORGLA03G0222700
N
0.742
ONIVA04G12350
Oryza nivara
ONIVA04G12350
N
0.734
ONIVA07G08430
Oryza nivara
ONIVA07G08430
N
0.729
Traes_4AL_7B4A599EC
Triticum aestivum
Traes_4AL_7B4A599EC
N
0.727
OBART03G24660
Oryza barthii
OBART03G24660
N
0.722
Traes_4BS_EC11C40EC
Triticum aestivum
Traes_4BS_EC11C40EC
N
0.711
ORUFI04G15420
Oryza rufipogon
ORUFI04G15420
N
0.709
AC200124.3_FG005
Zea mays
AC200124.3_FG005
N
0.709