CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ORUFI01G40080
(
Oryza rufipogon
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
ORUFI01G40080
T200991_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ORUFI01G40080.1
GRAS
102
168
VVRFLQSIAAFLADGTCQMQVNDGLSCIVDLAGGVGGGRSAQQLASAFTEALALRRVLAPAPPLWPS
ORUFI01G40080.1
GRAS
326
392
MVWFLRSIAAFLADGTCQMQVNDGLSCVVDLASGVGGERSALRLASTFAEALALRVLAPTPPLWPLP
ORUFI01G40080.1
GRAS
595
989
VVDLAGGDADGGGVGEGRSAQRLASAFAEALALRFILPCDGVCRSLHLTRAPPPPAVSAARQGFRAMCPFVRLAAAAANLSIAEVMEAERAVVHVVDLGGGVDANQWVELVRLVAARPGGPPGLLRLTVVNESEDFLSAVAAYVAAEAQRLDLSLQFHPVLSSIEELSATATGSIGSRLVVIPGQPLAVVANLQIHRLLAFPDYVDGVASRRPAAEQSGSSQHTMTTATKTKADALLRAIRDLNPKLVVLTENEADHNVAELGARVWNALNYYAALFDALEASSTPPAAVPPHERACVERWVLGEEIKDIVVREGTGRRERHETLGRWAERMVAAGFSPVTAARALASTETLAQQMVAAGGGGAGAGVLRAAHGGGCFPVICWCDVPVFSVSTWT
Links
Other
GRAS
family TFs
Other
Oryza rufipogon
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OS05G0378200
Oryza sativa
OS05G0378200
N
0.729
ONIVA05G14980
Oryza nivara
ONIVA05G14980
N
0.722
ORGLA05G0124000
Oryza glaberrima
ORGLA05G0124000
N
0.718
OGLUM05G15270
Oryza glumaepatula
OGLUM05G15270
N
0.709