PGSC0003DMG400004649 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400004649 T201108_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400011838 GRAS 26 444
PGSC0003DMT400011839 GRAS 47 465

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.984
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.874
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.851
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.830
TCM_040833 Theobroma cacao TCM_040833 N 0.816
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.814
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.803
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.800
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.796
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.793
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.792
Pm012190 Prunus mume Pm012190 N 0.789
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.786
Ca_27441 Cicer arietinum Ca_27441 N 0.784
Ca_11133 Cicer arietinum Ca_11133 N 0.782
30024.m001746 Ricinus communis 30024.m001746 N 0.781
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.778
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.775
mgf008315m Mimulus guttatus mgf008315m N 0.771
Cla006433 Citrullus lanatus Cla006433 N 0.770
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.767
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.764
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.763
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.762
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.762
mgf022906m Mimulus guttatus mgf022906m N 0.759
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.759
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.759
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.756
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.755
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.755
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.755
30131.m007244 Ricinus communis 30131.m007244 N 0.753
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.751
SCL3 Arabidopsis thaliana AT1G50420 N 0.751
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.748
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.748
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.743
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.742
TCM_042392 Theobroma cacao TCM_042392 N 0.742
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.740
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.740
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.740
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.740
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.740
PK02707.1 Cannabis sativa PK02707.1 N 0.737
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.734
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.734
Bo3g179450 Brassica oleracea Bo3g179450 N 0.729
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.729
Bra014251 Brassica rapa Bra014251 N 0.729
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.729
Bo5g078760 Brassica oleracea Bo5g078760 N 0.726
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.726
Pm016466 Prunus mume Pm016466 N 0.726
Pm029840 Prunus mume Pm029840 N 0.726
Bra018848 Brassica rapa Bra018848 N 0.726
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.725
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.723
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.721
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.718
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.718
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.715
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.715
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.714
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.712
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.711
Bo6g022200 Brassica oleracea Bo6g022200 N 0.707