PGSC0003DMG400015692 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400015692 T201127_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400040589 GRAS 199 574

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

90 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Solyc11g011260.1 Solanum lycopersicum Solyc11g011260.1 N 0.994
Pm014329 Prunus mume Pm014329 I 0.844
MDP0000669451 Malus domestica MDP0000669451 I 0.844
VIT_14s0006g00640 Vitis vinifera VIT_14s0006g00640 I 0.839
PRUPE_ppa003206mg Prunus persica PRUPE_ppa003206mg I 0.835
Ciclev10011367m.g Citrus clementina Ciclev10011367m.g N 0.825
Eucgr.J01594 Eucalyptus grandis Eucgr.J01594 I 0.823
POPTR_0005s14540 Populus trichocarpa POPTR_0005s14540 I 0.823
orange1.1g008153m.g Citrus sinensis orange1.1g008153m.g N 0.822
cassava6237.valid.m1 Manihot esculenta cassava6237.valid.m1 I 0.822
Lus10017626.g Linum usitatissimum Lus10017626.g N 0.818
POPTR_0004s08890 Populus trichocarpa POPTR_0004s08890 I 0.817
Lus10033583.g Linum usitatissimum Lus10033583.g N 0.813
TCM_019165 Theobroma cacao TCM_019165 N 0.813
evm.TU.supercontig_116.43 Carica papaya evm.TU.supercontig_116.43 I 0.806
POPTR_0008s13090 Populus trichocarpa POPTR_0008s13090 N 0.804
28677.m000055 Ricinus communis 28677.m000055 N 0.803
evm.TU.supercontig_2.240 Carica papaya evm.TU.supercontig_2.240 I 0.801
cassava15077.m1 Manihot esculenta cassava15077.m1 N 0.801
GLYMA18G04500 Glycine max GLYMA18G04500 I 0.800
Lus10009133.g Linum usitatissimum Lus10009133.g N 0.800
29692.m000540 Ricinus communis 29692.m000540 N 0.798
GLYMA11G33720 Glycine max GLYMA11G33720 I 0.797
cassava14484.m1 Manihot esculenta cassava14484.m1 N 0.796
POPTR_0010s12080 Populus trichocarpa POPTR_0010s12080 N 0.793
LjT40K11.90.nc Lotus japonicus LjT40K11.90.nc N 0.791
LjT15P09.140.nc Lotus japonicus LjT15P09.140.nc N 0.791
SapurV1A.0015s0210 Salix purpurea SapurV1A.0015s0210 N 0.790
SapurV1A.0102s0220 Salix purpurea SapurV1A.0102s0220 N 0.789
GAI1 Vitis vinifera VIT_01s0011g05260 N 0.789
Cla020062 Citrullus lanatus Cla020062 N 0.789
Gorai.001G089400 Gossypium raimondii Gorai.001G089400 I 0.789
PK14700.1 Cannabis sativa PK14700.1 N 0.787
TCM_010965 Theobroma cacao TCM_010965 N 0.784
SapurV1A.0405s0090 Salix purpurea SapurV1A.0405s0090 N 0.784
MTR_3g065980 Medicago truncatula MTR_3g065980 N 0.783
Ca_05046 Cicer arietinum Ca_05046 N 0.782
Eucgr.G02163 Eucalyptus grandis Eucgr.G02163 N 0.779
Gorai.002G177000 Gossypium raimondii Gorai.002G177000 N 0.776
Ca_13295 Cicer arietinum Ca_13295 I 0.775
Cucsa.006260 Cucumis sativus Cucsa.006260 N 0.773
Pm006304 Prunus mume Pm006304 N 0.773
Cagra.2235s0013 Capsella grandiflora Cagra.2235s0013 N 0.771
PRUPE_ppa005944mg Prunus persica PRUPE_ppa005944mg N 0.770
Bostr.7903s0021 Boechera stricta Bostr.7903s0021 N 0.768
mgf008289m Mimulus guttatus mgf008289m N 0.767
GLYMA08G10140 Glycine max GLYMA08G10140 N 0.766
AMTR_s00010p00148880 Amborella trichopoda AMTR_s00010p00148880 N 0.765
RGA Arabidopsis thaliana AT2G01570 N 0.765
Bo7g078550 Brassica oleracea Bo7g078550 N 0.763
Thhalv10005482m.g Eutrema salsugineum Thhalv10005482m.g N 0.763
RGA1 Arabidopsis lyrata fgenesh2_kg.5__65__AT2G01570.1 N 0.763
Bra024875 Brassica rapa Bra024875 N 0.763
GLYMA05G27190 Glycine max GLYMA05G27190 N 0.761
Carubv10008833m.g Capsella rubella Carubv10008833m.g N 0.759
MDP0000237978 Malus domestica MDP0000237978 N 0.759
Cagra.3501s0003 Capsella grandiflora Cagra.3501s0003 N 0.759
Cla003996 Citrullus lanatus Cla003996 N 0.759
Cucsa.280310 Cucumis sativus Cucsa.280310 N 0.759
GAI Arabidopsis lyrata fgenesh2_kg.1__1634__AT1G14920.1 N 0.753
GAI Arabidopsis thaliana AT1G14920 N 0.753
Bostr.7128s0107 Boechera stricta Bostr.7128s0107 N 0.753
Thhalv10007323m.g Eutrema salsugineum Thhalv10007323m.g N 0.751
F775_03572 Aegilops tauschii F775_03572 N 0.750
Aquca_091_00032 Aquilegia coerulea Aquca_091_00032 N 0.748
orange1.1g043131m.g Citrus sinensis orange1.1g043131m.g N 0.747
Carubv10018534m.g Capsella rubella Carubv10018534m.g N 0.747
Ciclev10017466m.g Citrus clementina Ciclev10017466m.g N 0.744
mgf025772m Mimulus guttatus mgf025772m N 0.720
Traes_4AL_77F4CC833 Triticum aestivum Traes_4AL_77F4CC833 N 0.714
Aquca_002_01300 Aquilegia coerulea Aquca_002_01300 N 0.714
GRMZM2G144744 Zea mays GRMZM2G144744 N 0.711
MLOC_67940 Hordeum vulgare MLOC_67940 N 0.710
LPERR03G26000 Leersia perrieri LPERR03G26000 N 0.707
OGLUM03G31610 Oryza glumaepatula OGLUM03G31610 N 0.707
OPUNC03G28530 Oryza punctata OPUNC03G28530 N 0.707
Pavir.Ib04357 Panicum virgatum Pavir.Ib04357 N 0.705
RGL2 Arabidopsis lyrata fgenesh2_kg.3__292__AT3G03450.1 I 0.704
ORGLA03G0290200 Oryza glaberrima ORGLA03G0290200 N 0.702
ORUFI03G32650 Oryza rufipogon ORUFI03G32650 N 0.702
SLR1 Oryza sativa OS03G0707600 N 0.702
Si039400m.g Setaria italica Si039400m.g N 0.702
OB03G38380 Oryza brachyantha OB03G38380 N 0.702
ONIVA03G32670 Oryza nivara ONIVA03G32670 N 0.702
OBART03G31370 Oryza barthii OBART03G31370 N 0.702
Pavir.Ia00840 Panicum virgatum Pavir.Ia00840 N 0.702
SLR1 Oryza indica BGIOSGA013420 N 0.702
OMERI03G27970 Oryza meridionalis OMERI03G27970 N 0.702
GRMZM2G024973 Zea mays GRMZM2G024973 N 0.700
BRADI1G11090 Brachypodium distachyon BRADI1G11090 N 0.700