PGSC0003DMG400022187 (Solanum tuberosum)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 PGSC0003DMG400022187 T201138_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400057111 GRAS 167 537
PGSC0003DMT400057112 GRAS 167 537

Links

Other GRAS family TFs
Other Solanum tuberosum TFs

64 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.707
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.743
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.726
PAT1 Arabidopsis thaliana AT5G48150 N 0.737
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.732
Bo2g149670 Brassica oleracea Bo2g149670 N 0.715
Bo7g089080 Brassica oleracea Bo7g089080 N 0.707
Bo9g009260 Brassica oleracea Bo9g009260 N 0.713
Bra036185 Brassica rapa Bra036185 N 0.713
Bra020715 Brassica rapa Bra020715 N 0.715
PK15082.1 Cannabis sativa PK15082.1 N 0.718
PK09018.1 Cannabis sativa PK09018.1 N 0.740
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.734
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.734
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.759
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.743
Ca_09786 Cicer arietinum Ca_09786 N 0.753
Cla004565 Citrullus lanatus Cla004565 N 0.734
Cla001429 Citrullus lanatus Cla001429 N 0.743
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.740
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.729
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.743
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.740
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.710
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.756
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.737
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.707
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.734
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.767
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.764
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.778
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.770
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.721
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.767
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.745
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.737
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.705
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.727
MDP0000284679 Malus domestica MDP0000284679 N 0.718
MDP0000152670 Malus domestica MDP0000152670 N 0.759
MDP0000205236 Malus domestica MDP0000205236 N 0.718
MDP0000804652 Malus domestica MDP0000804652 N 0.764
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.762
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.767
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.756
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.705
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.759
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.767
Pm015021 Prunus mume Pm015021 N 0.767
Pm012019 Prunus mume Pm012019 N 0.748
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.762
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.724
29949.m000124 Ricinus communis 29949.m000124 N 0.755
27613.m000642 Ricinus communis 27613.m000642 N 0.767
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.778
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.745
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.753
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.986
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.748
TCM_030733 Theobroma cacao TCM_030733 N 0.756
TCM_002319 Theobroma cacao TCM_002319 N 0.764
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.762
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.753