POPTR_0003s12240 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0003s12240 T201183_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0003s12240.1 GRAS 283 650

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N 0.934
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N 0.921
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N 0.912
cassava41178.m1 Manihot esculenta cassava41178.m1 N 0.855
cassava2243.valid.m1 Manihot esculenta cassava2243.valid.m1 N 0.855
30190.m011131 Ricinus communis 30190.m011131 N 0.847
Pm023754 Prunus mume Pm023754 N 0.841
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N 0.836
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N 0.833
TCM_016186 Theobroma cacao TCM_016186 N 0.830
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N 0.819
MDP0000915100 Malus domestica MDP0000915100 N 0.816
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N 0.814
gene32389-v1.0-hybrid Fragaria vesca gene32389-v1.0-hybrid N 0.808
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N 0.803
Gorai.003G162400 Gossypium raimondii Gorai.003G162400 N 0.800
PK26305.1 Cannabis sativa PK26305.1 N 0.786
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N 0.778
LjSGA_020116.2 Lotus japonicus LjSGA_020116.2 N 0.775
Ca_08738 Cicer arietinum Ca_08738 N 0.775
Lus10006322.g Linum usitatissimum Lus10006322.g N 0.775
Lus10029592.g Linum usitatissimum Lus10029592.g N 0.773
Solyc08g080400.1 Solanum lycopersicum Solyc08g080400.1 N 0.770
PGSC0003DMG400003047 Solanum tuberosum PGSC0003DMG400003047 N 0.770
Cla004494 Citrullus lanatus Cla004494 N 0.762
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N 0.762
GLYMA05G03490 Glycine max GLYMA05G03490 N 0.753
Cucsa.041620 Cucumis sativus Cucsa.041620 N 0.751
MTR_4g102790 Medicago truncatula MTR_4g102790 N 0.737
GLYMA17G14030 Glycine max GLYMA17G14030 N 0.732
Aquca_013_00407 Aquilegia coerulea Aquca_013_00407 N 0.723
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N 0.712
SCL28 Arabidopsis thaliana AT1G63100 N 0.710
Carubv10019945m.g Capsella rubella Carubv10019945m.g N 0.710
fgenesh1_pg.C_scaffold_2000170 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000170 N 0.707
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N 0.707