POPTR_0006s02220 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0006s02220 T201200_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s02220.1 GRAS 80 441

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

58 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
POPTR_0016s02030 Populus trichocarpa POPTR_0016s02030 N 0.950
SapurV1A.0295s0450 Salix purpurea SapurV1A.0295s0450 N 0.950
SapurV1A.0154s0180 Salix purpurea SapurV1A.0154s0180 N 0.925
cassava29451.valid.m1 Manihot esculenta cassava29451.valid.m1 N 0.906
TCM_002021 Theobroma cacao TCM_002021 N 0.903
29872.m000537 Ricinus communis 29872.m000537 N 0.892
Pm014866 Prunus mume Pm014866 N 0.887
chr3.CM0460.360.nd Lotus japonicus chr3.CM0460.360.nd N 0.887
PRUPE_ppa005742mg Prunus persica PRUPE_ppa005742mg N 0.887
evm.TU.supercontig_8.295 Carica papaya evm.TU.supercontig_8.295 N 0.881
gene24339-v1.0-hybrid Fragaria vesca gene24339-v1.0-hybrid N 0.878
Ciclev10011732m.g Citrus clementina Ciclev10011732m.g N 0.876
GLYMA11G10220 Glycine max GLYMA11G10220 N 0.870
Gorai.004G063200 Gossypium raimondii Gorai.004G063200 N 0.870
Ca_11130 Cicer arietinum Ca_11130 N 0.870
PK21090.1 Cannabis sativa PK21090.1 N 0.867
MDP0000287321 Malus domestica MDP0000287321 N 0.867
MDP0000289554 Malus domestica MDP0000289554 N 0.865
MDP0000269044 Malus domestica MDP0000269044 N 0.865
VIT_03s0017g01660 Vitis vinifera VIT_03s0017g01660 N 0.856
Eucgr.A00903 Eucalyptus grandis Eucgr.A00903 N 0.856
orange1.1g013903m.g Citrus sinensis orange1.1g013903m.g N 0.848
OB07G24850 Oryza brachyantha OB07G24850 N 0.844
OS07G0567700 Oryza sativa OS07G0567700 N 0.844
Cucsa.180010 Cucumis sativus Cucsa.180010 N 0.840
Cla005525 Citrullus lanatus Cla005525 N 0.837
GLYMA12G02530 Glycine max GLYMA12G02530 N 0.837
MTR_4g076020 Medicago truncatula MTR_4g076020 N 0.818
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.812
Aquca_030_00364 Aquilegia coerulea Aquca_030_00364 N 0.798
Solyc07g043330.1 Solanum lycopersicum Solyc07g043330.1 N 0.793
PGSC0003DMG400011742 Solanum tuberosum PGSC0003DMG400011742 N 0.785
ORUFI07G19860 Oryza rufipogon ORUFI07G19860 N 0.751
ORGLA07G0244600 Oryza glaberrima ORGLA07G0244600 N 0.751
ONIVA07G17430 Oryza nivara ONIVA07G17430 N 0.751
OPUNC07G17970 Oryza punctata OPUNC07G17970 N 0.751
OPUNC07G18000 Oryza punctata OPUNC07G18000 N 0.751
BGIOSGA025964 Oryza indica BGIOSGA025964 N 0.751
OGLUM07G18870 Oryza glumaepatula OGLUM07G18870 N 0.751
OMERI07G15800 Oryza meridionalis OMERI07G15800 N 0.749
LPERR07G16410 Leersia perrieri LPERR07G16410 N 0.743
OBART07G19080 Oryza barthii OBART07G19080 N 0.740
Pavir.Ba00637 Panicum virgatum Pavir.Ba00637 N 0.740
Pavir.Bb03100 Panicum virgatum Pavir.Bb03100 N 0.732
fgenesh2_kg.7__3225__AT5G41920.1 Arabidopsis lyrata fgenesh2_kg.7__3225__AT5G41920.1 N 0.730
SCL23 Arabidopsis thaliana AT5G41920 N 0.729
Si032551m.g Setaria italica Si032551m.g N 0.729
MLOC_62589 Hordeum vulgare MLOC_62589 N 0.724
GRMZM2G106548 Zea mays GRMZM2G106548 N 0.721
Bostr.17016s0016 Boechera stricta Bostr.17016s0016 N 0.721
Carubv10004949m.g Capsella rubella Carubv10004949m.g N 0.719
BRADI1G24310 Brachypodium distachyon BRADI1G24310 N 0.718
Bostr.25375s0003 Boechera stricta Bostr.25375s0003 N 0.717
Cagra.6263s0002 Capsella grandiflora Cagra.6263s0002 N 0.715
Thhalv10027784m.g Eutrema salsugineum Thhalv10027784m.g N 0.713
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.712
Traes_2BS_015167E00 Triticum aestivum Traes_2BS_015167E00 N 0.707
Bo4g143710 Brassica oleracea Bo4g143710 N 0.704