POPTR_0008s05750 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0008s05750 T201209_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0008s05750.1 GRAS 366 737

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0451s0060 Salix purpurea SapurV1A.0451s0060 N 0.949
XM_002316242.1 Populus trichocarpa POPTR_0010s20980 N 0.876
cassava31335.valid.m1 Manihot esculenta cassava31335.valid.m1 N 0.854
TCM_042705 Theobroma cacao TCM_042705 N 0.846
Gorai.011G266200 Gossypium raimondii Gorai.011G266200 N 0.843
27568.m000253 Ricinus communis 27568.m000253 N 0.841
orange1.1g004488m.g Citrus sinensis orange1.1g004488m.g N 0.838
Ciclev10030787m.g Citrus clementina Ciclev10030787m.g N 0.835
cassava15723.m1 Manihot esculenta cassava15723.m1 N 0.827
Lus10023404.g Linum usitatissimum Lus10023404.g N 0.824
Lus10040284.g Linum usitatissimum Lus10040284.g N 0.819
Gorai.010G201000 Gossypium raimondii Gorai.010G201000 N 0.803
evm.TU.supercontig_1.422 Carica papaya evm.TU.supercontig_1.422 N 0.773
PGSC0003DMG400006352 Solanum tuberosum PGSC0003DMG400006352 N 0.772
VIT_13s0019g01810 Vitis vinifera VIT_13s0019g01810 N 0.770
Pm018822 Prunus mume Pm018822 N 0.770
mgf014897m Mimulus guttatus mgf014897m N 0.765
PRUPE_ppa021438mg Prunus persica PRUPE_ppa021438mg N 0.765
Eucgr.G02939 Eucalyptus grandis Eucgr.G02939 N 0.754
Solyc04g011630.1 Solanum lycopersicum Solyc04g011630.1 N 0.754
VIT_13s0019g01700 Vitis vinifera VIT_13s0019g01700 N 0.748
Solyc05g053090.1 Solanum lycopersicum Solyc05g053090.1 N 0.743
PGSC0003DMG400027198 Solanum tuberosum PGSC0003DMG400027198 N 0.743
VIT_08s0007g00510 Vitis vinifera VIT_08s0007g00510 N 0.741
Eucgr.G02941 Eucalyptus grandis Eucgr.G02941 N 0.732
Aquca_009_00954 Aquilegia coerulea Aquca_009_00954 N 0.730
Pm002685 Prunus mume Pm002685 N 0.730
PRUPE_ppa001883mg Prunus persica PRUPE_ppa001883mg N 0.727
Eucgr.G02940 Eucalyptus grandis Eucgr.G02940 N 0.714
Cla018179 Citrullus lanatus Cla018179 N 0.714
PDK_20s1329542g002 Phoenix dactylifera PDK_20s1329542g002 N 0.712
GLYMA18G39920 Glycine max GLYMA18G39920 N 0.710
POPTR_0006s08690 Populus trichocarpa POPTR_0006s08690 N 0.708
Cucsa.175500 Cucumis sativus Cucsa.175500 N 0.708
orange1.1g004514m.g Citrus sinensis orange1.1g004514m.g N 0.705
Ciclev10011141m.g Citrus clementina Ciclev10011141m.g N 0.705
SapurV1A.0001s1700 Salix purpurea SapurV1A.0001s1700 N 0.705
VIT_13s0019g01710 Vitis vinifera VIT_13s0019g01710 N 0.705
29767.m000200 Ricinus communis 29767.m000200 N 0.702
GLYMA07G15950 Glycine max GLYMA07G15950 N 0.702
TCM_021920 Theobroma cacao TCM_021920 N 0.700