POPTR_0016s01110 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0016s01110 T201237_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0016s01110.1 GRAS 176 546

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SapurV1A.0823s0110 Salix purpurea SapurV1A.0823s0110 N 0.970
POPTR_0006s01720 Populus trichocarpa POPTR_0006s01720 N 0.932
SapurV1A.0359s0250 Salix purpurea SapurV1A.0359s0250 N 0.932
Lus10000539.g Linum usitatissimum Lus10000539.g N 0.802
Lus10017554.g Linum usitatissimum Lus10017554.g N 0.802
27529.m000047 Ricinus communis 27529.m000047 N 0.802
Ciclev10014811m.g Citrus clementina Ciclev10014811m.g N 0.772
orange1.1g008984m.g Citrus sinensis orange1.1g008984m.g N 0.770
TCM_030393 Theobroma cacao TCM_030393 N 0.762
Gorai.009G184100 Gossypium raimondii Gorai.009G184100 N 0.751
Eucgr.D01435 Eucalyptus grandis Eucgr.D01435 N 0.751
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.751
SCL13 Arabidopsis lyrata fgenesh2_kg.7__2586__AT4G17230.1 N 0.739
GLYMA09G01440 Glycine max GLYMA09G01440 N 0.737
GLYMA15G12320 Glycine max GLYMA15G12320 N 0.734
evm.TU.supercontig_27.254 Carica papaya evm.TU.supercontig_27.254 N 0.733
Gorai.010G249400 Gossypium raimondii Gorai.010G249400 N 0.726
Pm012494 Prunus mume Pm012494 N 0.724
PRUPE_ppa003910mg Prunus persica PRUPE_ppa003910mg N 0.721
MDP0000254936 Malus domestica MDP0000254936 N 0.718
PK04573.1 Cannabis sativa PK04573.1 N 0.707
chr6.LjT16B20.120.nc Lotus japonicus chr6.LjT16B20.120.nc N 0.703
chr4.CM0288.500.nc Lotus japonicus chr4.CM0288.500.nc N 0.702