POPTR_0017s05450 (Populus trichocarpa)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 POPTR_0017s05450 T201252_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s05450.1 GRAS 67 440

Links

Other GRAS family TFs
Other Populus trichocarpa TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
GLYMA13G42100 Glycine max GLYMA13G42100 N 0.789
Aquca_058_00064 Aquilegia coerulea Aquca_058_00064 N 0.755
Ciclev10020072m.g Citrus clementina Ciclev10020072m.g N 0.882
Eucgr.A00109 Eucalyptus grandis Eucgr.A00109 N 0.827
evm.TU.supercontig_9.323 Carica papaya evm.TU.supercontig_9.323 N 0.794
Gorai.011G140100 Gossypium raimondii Gorai.011G140100 N 0.857
Gorai.011G140300 Gossypium raimondii Gorai.011G140300 N 0.854
orange1.1g047247m.g Citrus sinensis orange1.1g047247m.g N 0.723
SapurV1A.0485s0200 Salix purpurea SapurV1A.0485s0200 N 0.904
SapurV1A.0791s0060 Salix purpurea SapurV1A.0791s0060 N 0.920
SapurV1A.0865s0070 Salix purpurea SapurV1A.0865s0070 N 0.955
SapurV1A.0865s0080 Salix purpurea SapurV1A.0865s0080 N 0.893
SapurV1A.1272s0060 Salix purpurea SapurV1A.1272s0060 N 0.920
SapurV1A.1357s0040 Salix purpurea SapurV1A.1357s0040 N 0.926
PK11022.1 Cannabis sativa PK11022.1 N 0.844
mgf025327m Mimulus guttatus mgf025327m N 0.760
Cucsa.362140 Cucumis sativus Cucsa.362140 N 0.760
GLYMA15G03290 Glycine max GLYMA15G03290 N 0.800
GSMUA_Achr6G21350_001 Musa acuminata GSMUA_Achr6G21350_001 N 0.723
GSMUA_Achr9G02380_001 Musa acuminata GSMUA_Achr9G02380_001 N 0.717
MTR_2g099110 Medicago truncatula MTR_2g099110 N 0.799
PGSC0003DMG400014615 Solanum tuberosum PGSC0003DMG400014615 N 0.775
POPTR_0007s01650 Populus trichocarpa POPTR_0007s01650 N 0.923
PRUPE_ppa1027119mg Prunus persica PRUPE_ppa1027119mg N 0.852
Solyc08g014030.1 Solanum lycopersicum Solyc08g014030.1 N 0.775
TCM_019978 Theobroma cacao TCM_019978 N 0.860
VIT_00s0226g00070 Vitis vinifera VIT_00s0226g00070 N 0.863
Ca_02696 Cicer arietinum Ca_02696 N 0.791
Cla007135 Citrullus lanatus Cla007135 N 0.767
Pm007259 Prunus mume Pm007259 N 0.852
cassava11920.valid.m1 Manihot esculenta cassava11920.valid.m1 N 0.882
chr3.CM0106.470.nd Lotus japonicus chr3.CM0106.470.nd N 0.804