CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa003149mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa003149mg
T201271_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ09503
GRAS
223
594
LRTLLILCAQAVSADDRRTANELLKQIRQHSSPFGDGSQRLAHCFANGLEARLAGTGTQIYTALSSKRTSAADMLKAYQTYVAACPFTKVAIIFANHMISKLAEKAETLHIIDFGILYGFQWPALIHCLSRRAGGPPKLRITGIELPQSGFRPEERVQETGHRLAKYCERYNVPFEYTAIAKKWETIQIEELKVKRDEVLAVNCLFRFKNLLDETVAVNSPRDAVLNVIRRMNPDIFVHGIINGSYHAPFFVTRFREALFHFSALFDMFDTNLPREDPMRLMFEEEFLGREVVNTIACEGSERVVRPETYKQWQVRNMRAGFKQLPLDRELMNKLRMKVKLGYHRDFVVDEDGNWMLQGWKGRIIYCSSCWV
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm000719
Prunus mume
Pm000719
N
0.978
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.814
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.811
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.808
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.805
28650.m000191
Ricinus communis
28650.m000191
N
0.797
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.797
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.786
TCM_041815
Theobroma cacao
TCM_041815
N
0.765
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.759
Lus10016521.g
Linum usitatissimum
Lus10016521.g
N
0.757
GLYMA12G06670
Glycine max
GLYMA12G06670
N
0.757
Traes_4DS_050789E2A
Triticum aestivum
Traes_4DS_050789E2A
N
0.750
Gorai.001G111500
Gossypium raimondii
Gorai.001G111500
N
0.749
evm.TU.supercontig_81.124
Carica papaya
evm.TU.supercontig_81.124
N
0.749
Ca_16678
Cicer arietinum
Ca_16678
N
0.749
Lus10040790.g
Linum usitatissimum
Lus10040790.g
N
0.749
GLYMA11G14750
Glycine max
GLYMA11G14750
N
0.743
gene34381-v1.0-hybrid
Fragaria vesca
gene34381-v1.0-hybrid
N
0.742
Gorai.003G130600
Gossypium raimondii
Gorai.003G130600
N
0.741
VIT_06s0004g04950
Vitis vinifera
VIT_06s0004g04950
N
0.741
Thhalv10006868m.g
Eutrema salsugineum
Thhalv10006868m.g
N
0.735
Bo01118s010
Brassica oleracea
Bo01118s010
N
0.730
gene18433-v1.0-hybrid
Fragaria vesca
gene18433-v1.0-hybrid
N
0.728
Bra030688
Brassica rapa
Bra030688
N
0.727
MTR_4g064160
Medicago truncatula
MTR_4g064160
N
0.727
Ciclev10027848m.g
Citrus clementina
Ciclev10027848m.g
N
0.724
SCL14
Arabidopsis thaliana
AT1G07530
N
0.724
Bostr.25219s0207
Boechera stricta
Bostr.25219s0207
N
0.724
Carubv10008391m.g
Capsella rubella
Carubv10008391m.g
N
0.724
Cagra.1671s0373
Capsella grandiflora
Cagra.1671s0373
N
0.724
orange1.1g046158m.g
Citrus sinensis
orange1.1g046158m.g
N
0.722
POPTR_0009s03800
Populus trichocarpa
POPTR_0009s03800
N
0.719
Eucgr.B02350
Eucalyptus grandis
Eucgr.B02350
N
0.719
SapurV1A.0001s1700
Salix purpurea
SapurV1A.0001s1700
N
0.718
TCM_041814
Theobroma cacao
TCM_041814
N
0.717
Eucgr.J02042
Eucalyptus grandis
Eucgr.J02042
N
0.716
SapurV1A.0041s0170
Salix purpurea
SapurV1A.0041s0170
N
0.708
Bostr.27991s0167
Boechera stricta
Bostr.27991s0167
N
0.705
Solyc06g076280.1
Solanum lycopersicum
Solyc06g076280.1
N
0.705
GLYMA13G41240
Glycine max
GLYMA13G41240
N
0.703
28650.m000190
Ricinus communis
28650.m000190
N
0.703
Cagra.3264s0006
Capsella grandiflora
Cagra.3264s0006
N
0.703
Carubv10024938m.g
Capsella rubella
Carubv10024938m.g
N
0.703
VIT_08s0007g00510
Vitis vinifera
VIT_08s0007g00510
N
0.700