CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PRUPE_ppa005079mg
(
Prunus persica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
PRUPE_ppa005079mg
T201282_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EMJ06331
GRAS
57
476
MEQLLVHCANAIETNDATLAQQILWVLNNIAPQDGDSNQRLTCAFLRALIVRAVNIGSCKLLAAMANSQANFTIHTHKFSVIELASFIDLTPWHRFGFTAANAAILEAVEGYSVIHIVDLSLTHCMQIPTLVDAIAGRQEGNVSPPLLKLTVAGSTEDVPPMLDLSYEELGSKLVNFARSRNIILEFRVIPSSYTDGFANLIQQLRVQNLVYAESGEALVVNCHMMLHYIPEETLTLPSINSNPNLSSCGSSSSYGYDVASSSSTSASSSLRTMFLKALRGLDPTVVVLVDEDADLTSNNLVCRLRSAFNYLWIPYDTVDTFLPRGSKQRQWYEADMCWKIENVIAYEGFQRVERVEPKCRWVQRMRNANFQSVSFGEDAVLEVKAMLDEHAAGWGLKREEEDVVLTWKGHNVVFATAWM
Links
Other
GRAS
family TFs
Other
Prunus persica
TFs
30 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pm002406
Prunus mume
Pm002406
N
0.984
MDP0000247514
Malus domestica
MDP0000247514
N
0.938
Traes_2AS_E17243D52
Triticum aestivum
Traes_2AS_E17243D52
N
0.907
gene05720-v1.0-hybrid
Fragaria vesca
gene05720-v1.0-hybrid
N
0.901
VIT_07s0129g00340
Vitis vinifera
VIT_07s0129g00340
N
0.839
Traes_2DS_9A08AAEE4
Triticum aestivum
Traes_2DS_9A08AAEE4
N
0.836
29661.m000901
Ricinus communis
29661.m000901
N
0.811
cassava10176.m1
Manihot esculenta
cassava10176.m1
N
0.809
POPTR_0005s18920
Populus trichocarpa
POPTR_0005s18920
N
0.809
TCM_000764
Theobroma cacao
TCM_000764
N
0.808
Aquca_042_00139
Aquilegia coerulea
Aquca_042_00139
N
0.806
cassava8647.m1
Manihot esculenta
cassava8647.m1
N
0.803
SapurV1A.0116s0200
Salix purpurea
SapurV1A.0116s0200
N
0.798
POPTR_0007s10030
Populus trichocarpa
POPTR_0007s10030
N
0.797
Gorai.007G221900
Gossypium raimondii
Gorai.007G221900
N
0.792
orange1.1g043764m.g
Citrus sinensis
orange1.1g043764m.g
N
0.776
Ciclev10025567m.g
Citrus clementina
Ciclev10025567m.g
N
0.776
evm.TU.supercontig_6.41
Carica papaya
evm.TU.supercontig_6.41
N
0.772
chr4.CM0128.430.nc
Lotus japonicus
chr4.CM0128.430.nc
N
0.772
Solyc02g092570.1
Solanum lycopersicum
Solyc02g092570.1
N
0.762
PGSC0003DMG400024937
Solanum tuberosum
PGSC0003DMG400024937
N
0.759
GLYMA05G22140
Glycine max
GLYMA05G22140
N
0.753
mgf018442m
Mimulus guttatus
mgf018442m
N
0.750
Eucgr.H02292
Eucalyptus grandis
Eucgr.H02292
N
0.749
MTR_4g095500
Medicago truncatula
MTR_4g095500
N
0.747
GLYMA17G17710
Glycine max
GLYMA17G17710
N
0.745
Gorai.007G056200
Gossypium raimondii
Gorai.007G056200
N
0.740
PK13595.1
Cannabis sativa
PK13595.1
N
0.733
Cucsa.103040
Cucumis sativus
Cucsa.103040
N
0.715
Cla014227
Citrullus lanatus
Cla014227
N
0.712