CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb09g001140
(
Sorghum bicolor
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Sb09g001140
T201374_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb09g001140.1
GRAS
210
580
LRALLIQCAQAISSNNHPFASELLKKIRHHSSPYGDGFQRLAIYFADALEARVAGTGSQMYQKLVVKQTSCLDMLKAYSLFIAASPFVRVAYYFGNKTIVDVLGGRPRVHIIDFGILFGFQWPSLIQRLAKREGGPPQLRITGINVPETGFRPCKTIEETGKRLAEYARMFNVPFQYQGVASRWEDIYIPDLNIDKDEVLIVNCLHKMKNLGDETEDIDSARDRVLRIMKRMNPNVLIIGVMNGLYSSPFFLPRFREALFYYSSQFDMLNSTVAQNHEARILIERDLLGADVFNVVACEGAERIERPESYKQWQVRILKAGFKQLPVNQTILKSSLDRKELYHEDFVIDEDSGWLLQGWKGRIMHALSSWK
Links
Other
GRAS
family TFs
Other
Sorghum bicolor
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GRMZM2G346706
Zea mays
GRMZM2G346706
N
0.894
Si024539m.g
Setaria italica
Si024539m.g
N
0.814
Pavir.J13192
Panicum virgatum
Pavir.J13192
N
0.802
Pavir.Ca00616
Panicum virgatum
Pavir.Ca00616
N
0.802
Si024734m.g
Setaria italica
Si024734m.g
N
0.765
Pavir.J19106
Panicum virgatum
Pavir.J19106
N
0.762
BGIOSGA018951
Oryza indica
BGIOSGA018951
N
0.753
OLONG_003058
Oryza longistaminata
OLONG_003058
N
0.753
Pavir.J21106
Panicum virgatum
Pavir.J21106
N
0.743
Pavir.J40654
Panicum virgatum
Pavir.J40654
N
0.742
Sb01g015760
Sorghum bicolor
Sb01g015760
N
0.730
GRMZM2G089636
Zea mays
GRMZM2G089636
N
0.714