CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si000959m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si000959m.g
T201485_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si000959m
GRAS
164
537
LVQLLVACAEAVACRDRAQAAALLRELQVGAPVHGTAFQRVASCFVQGLADRLALAHPPALGPASMAFCIPPSCAGRDGARGEALALAYELCPYLRFAHFVANASILEAFEGESNVHVVDLGMTLGLDRGHQWRGLLDGLAARAGAKPKRVRVTGVGAPLDTMRAVGRELEAYAEGLGMRLEFRAVDRSLESLHADDLGVAADEAVAISSVLELHCVVKESRGALNSVLQTVRKLSPRAFVLVEQDAGHNGPFFLGRFMEALHYYAAVFDALDAALPRYDARRARVEQFHFGAEIRNVVGCEGVARVERHERADQWRRRMSRAGFQSVPIRMAARAREWLEENAGGGGYTVAEEKGCLVLGWKGKPLIAASCWK
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.J09064
Panicum virgatum
Pavir.J09064
N
0.953
Sb03g043030
Sorghum bicolor
Sb03g043030
N
0.948
Pavir.J35085
Panicum virgatum
Pavir.J35085
N
0.947
GRMZM2G013016
Zea mays
GRMZM2G013016
N
0.934
BGIOSGA004999
Oryza indica
BGIOSGA004999
N
0.931
OMERI01G37870
Oryza meridionalis
OMERI01G37870
N
0.929
OGLUM01G45030
Oryza glumaepatula
OGLUM01G45030
N
0.913
ORUFI01G44170
Oryza rufipogon
ORUFI01G44170
N
0.912
TRAES3BF071100020CFD_g
Triticum aestivum
TRAES3BF071100020CFD_g
N
0.912
ONIVA01G45890
Oryza nivara
ONIVA01G45890
N
0.910
ORGLA01G0347800
Oryza glaberrima
ORGLA01G0347800
N
0.896
Sb03g010920
Sorghum bicolor
Sb03g010920
N
0.887
TRAES3BF071100040CFD_g
Triticum aestivum
TRAES3BF071100040CFD_g
N
0.887
OBART01G40830
Oryza barthii
OBART01G40830
N
0.877
F775_10732
Aegilops tauschii
F775_10732
N
0.866
OB01G49600
Oryza brachyantha
OB01G49600
N
0.859
BRADI2G57940
Brachypodium distachyon
BRADI2G57940
N
0.854
ORUFI01G44140
Oryza rufipogon
ORUFI01G44140
N
0.844
LPERR01G35370
Leersia perrieri
LPERR01G35370
N
0.803
OBART01G40850
Oryza barthii
OBART01G40850
N
0.795
OPUNC01G39690
Oryza punctata
OPUNC01G39690
N
0.737
ONIVA01G45910
Oryza nivara
ONIVA01G45910
N
0.715
BGIOSGA005001
Oryza indica
BGIOSGA005001
N
0.715
TRAES3BF071100030CFD_g
Triticum aestivum
TRAES3BF071100030CFD_g
N
0.701