CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Si040022m.g
(
Setaria italica
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
Si040022m.g
T201538_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Si040022m
GRAS
125
519
LLHLLMAAAEALSGPHKSRELARVILVRLKQMVSHTGDSAAVSNMERLAAHFTDALQGLLDGSHPAGGAGRQAAAASHGHHHQHAGDVLTAFQMLQDMSPYMKFGHFTANQAILEAVAGDRRVHVVDYDIAEGVQWASLMQAMISRPDGVPPPHLRITAVSRGGGGGARAVQEAGRRLAAFAASIGQPFSFGQCRLDSDERFRPATVRMVKGETLVANCVLNQAAATTTIRRPTGSVASFLAGMATLGAKVVTVVEEDQGEPEKDDEEAGGGFVARFMEELHRYSAVWDSLEAGFPTQSRVRGLVERAILAPNIAGAVSRAYRAVDGDGEAARAGWGEWMRGNGFRAVPLSCFNHSQARLLLGLFNDGYTMEETSPNRIVLGWKARRLLSASVWA
Links
Other
GRAS
family TFs
Other
Setaria italica
TFs
18 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ib01112
Panicum virgatum
Pavir.Ib01112
N
0.941
GRMZM2G055263
Zea mays
GRMZM2G055263
N
0.930
Pavir.Ia03522
Panicum virgatum
Pavir.Ia03522
N
0.928
Sb01g040270
Sorghum bicolor
Sb01g040270
N
0.922
ONIVA03G12680
Oryza nivara
ONIVA03G12680
N
0.887
ORUFI03G11840
Oryza rufipogon
ORUFI03G11840
N
0.887
OGLUM03G11450
Oryza glumaepatula
OGLUM03G11450
N
0.887
BGIOSGA012273
Oryza indica
BGIOSGA012273
N
0.887
OMERI03G10770
Oryza meridionalis
OMERI03G10770
N
0.884
OPUNC03G11040
Oryza punctata
OPUNC03G11040
N
0.882
ORGLA03G0111000
Oryza glaberrima
ORGLA03G0111000
N
0.879
OB03G21650
Oryza brachyantha
OB03G21650
N
0.876
BRADI1G67340
Brachypodium distachyon
BRADI1G67340
N
0.858
TRIUR3_13261
Triticum urartu
TRIUR3_13261
N
0.854
Traes_4AS_19FA06316
Triticum aestivum
Traes_4AS_19FA06316
N
0.854
LPERR03G10210
Leersia perrieri
LPERR03G10210
N
0.847
Traes_4BL_CDCFB216C
Triticum aestivum
Traes_4BL_CDCFB216C
N
0.827
Traes_4DL_5B3B57371
Triticum aestivum
Traes_4DL_5B3B57371
N
0.820