CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TCM_007806
(
Theobroma cacao
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
TCM_007806
T201605_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EOX99208
GRAS
43
439
IEKLLLHCASALESNDVTLAQQVMWVLNNVASSVGDPNQRLTSWFLKALISKASRVCPTTMNFHGGSTFQRRLMTVIELAGYVDLLPWHRFGFCASNSAIFKAVRGYPKVHILDFSITHCMQWPTLIDALAKRPEGPSSLRITVPSYRPPVPPMLNVSTEEVGHRLANFAKFRDVPFEFHVIDDPSFPSSGEILSKESSAFQFESLLSHLTPSALDLREDEALVINCQNWLRYLSDERIGNTAHDSSLRDVFLDIIKGLNPRIIVVVDEDSDLSAPSLTSRITTCFNYLWIPFDALETFLPKDSSQRLEYESDIGQKIENIISFEGFQRIERLESGAKLSERMKNASFFSVPFCEETVTEVKFLLDEHASGWGMKEEEDMLILTWKGHKSVFATAWT
Links
Other
GRAS
family TFs
Other
Theobroma cacao
TFs
26 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Gorai.013G072100
Gossypium raimondii
Gorai.013G072100
N
0.853
orange1.1g041891m.g
Citrus sinensis
orange1.1g041891m.g
N
0.812
Ciclev10015222m.g
Citrus clementina
Ciclev10015222m.g
N
0.810
VIT_12s0059g02770
Vitis vinifera
VIT_12s0059g02770
N
0.810
cassava21819.m1
Manihot esculenta
cassava21819.m1
N
0.802
POPTR_0017s06900
Populus trichocarpa
POPTR_0017s06900
N
0.799
evm.TU.supercontig_8.255
Carica papaya
evm.TU.supercontig_8.255
N
0.796
30156.m001710
Ricinus communis
30156.m001710
N
0.791
SapurV1A.0187s0300
Salix purpurea
SapurV1A.0187s0300
N
0.788
SapurV1A.0312s0260
Salix purpurea
SapurV1A.0312s0260
N
0.785
POPTR_0007s02880
Populus trichocarpa
POPTR_0007s02880
N
0.781
PRUPE_ppa016112mg
Prunus persica
PRUPE_ppa016112mg
N
0.774
Pm015255
Prunus mume
Pm015255
N
0.766
MDP0000863616
Malus domestica
MDP0000863616
N
0.764
Eucgr.K00873
Eucalyptus grandis
Eucgr.K00873
N
0.761
GLYMA12G32350
Glycine max
GLYMA12G32350
N
0.758
gene23882-v1.0-hybrid
Fragaria vesca
gene23882-v1.0-hybrid
N
0.758
GLYMA13G38080
Glycine max
GLYMA13G38080
N
0.755
Ca_14137
Cicer arietinum
Ca_14137
N
0.755
Ca_27895
Cicer arietinum
Ca_27895
N
0.755
MTR_2g089100
Medicago truncatula
MTR_2g089100
N
0.753
PGSC0003DMG400026191
Solanum tuberosum
PGSC0003DMG400026191
N
0.731
Lus10018498.g
Linum usitatissimum
Lus10018498.g
N
0.728
Lus10039709.g
Linum usitatissimum
Lus10039709.g
N
0.726
Solyc07g052960.1
Solanum lycopersicum
Solyc07g052960.1
N
0.726
Aquca_012_00254
Aquilegia coerulea
Aquca_012_00254
N
0.723