TCM_017746 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_017746 T201613_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY03173 GRAS 420 778
EOY03174 GRAS 402 760
EOY03175 GRAS 402 625

Links

Other GRAS family TFs
Other Theobroma cacao TFs

69 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.006G236200 Gossypium raimondii Gorai.006G236200 N 0.955
POPTR_0016s15060 Populus trichocarpa POPTR_0016s15060 N 0.942
LPERR11G01220 Leersia perrieri LPERR11G01220 N 0.938
SapurV1A.0208s0090 Salix purpurea SapurV1A.0208s0090 N 0.933
cassava25218.valid.m1 Manihot esculenta cassava25218.valid.m1 N 0.933
Ciclev10011085m.g Citrus clementina Ciclev10011085m.g N 0.930
orange1.1g014896m.g Citrus sinensis orange1.1g014896m.g N 0.930
cassava36326.valid.m1 Manihot esculenta cassava36326.valid.m1 N 0.925
30073.m002204 Ricinus communis 30073.m002204 N 0.925
evm.TU.supercontig_1018.1 Carica papaya evm.TU.supercontig_1018.1 N 0.925
POPTR_0006s11500 Populus trichocarpa POPTR_0006s11500 N 0.922
Gorai.005G001300 Gossypium raimondii Gorai.005G001300 N 0.922
SCR Vitis vinifera VIT_08s0056g00050 N 0.916
PRUPE_ppa001546mg Prunus persica PRUPE_ppa001546mg N 0.916
Pm002956 Prunus mume Pm002956 N 0.914
gene13644-v1.0-hybrid Fragaria vesca gene13644-v1.0-hybrid N 0.908
SapurV1A.1165s0100 Salix purpurea SapurV1A.1165s0100 N 0.908
MDP0000397638 Malus domestica MDP0000397638 N 0.903
chr1.CM1255.400.nc Lotus japonicus chr1.CM1255.400.nc N 0.903
Eucgr.K01320 Eucalyptus grandis Eucgr.K01320 N 0.903
Thhalv10010179m.g Eutrema salsugineum Thhalv10010179m.g N 0.897
GLYMA09G40620 Glycine max GLYMA09G40620 N 0.894
Bo8g083500 Brassica oleracea Bo8g083500 N 0.894
SCR Arabidopsis thaliana AT3G54220 N 0.891
SCR Arabidopsis lyrata fgenesh2_kg.5__1811__AT3G54220.1 N 0.891
GLYMA18G45220 Glycine max GLYMA18G45220 N 0.891
Carubv10016802m.g Capsella rubella Carubv10016802m.g N 0.891
Cagra.0562s0013 Capsella grandiflora Cagra.0562s0013 N 0.891
Bostr.0697s0034 Boechera stricta Bostr.0697s0034 N 0.891
mgf012242m Mimulus guttatus mgf012242m N 0.891
Ca_09530 Cicer arietinum Ca_09530 N 0.889
MTR_7g074650 Medicago truncatula MTR_7g074650 N 0.889
Cla012346 Citrullus lanatus Cla012346 N 0.889
Cucsa.002880 Cucumis sativus Cucsa.002880 N 0.886
Solyc10g074680.1 Solanum lycopersicum Solyc10g074680.1 N 0.880
PGSC0003DMG400016833 Solanum tuberosum PGSC0003DMG400016833 N 0.875
Aquca_004_00566 Aquilegia coerulea Aquca_004_00566 N 0.872
GSMUA_Achr8G09400_001 Musa acuminata GSMUA_Achr8G09400_001 N 0.827
LPERR12G01340 Leersia perrieri LPERR12G01340 N 0.818
GRMZM2G131516 Zea mays GRMZM2G131516 N 0.816
SCR2 Oryza sativa OS12G0122000 N 0.813
BGIOSGA036912 Oryza indica BGIOSGA036912 N 0.813
ORUFI12G01460 Oryza rufipogon ORUFI12G01460 N 0.813
Sb05g001500 Sorghum bicolor Sb05g001500 N 0.813
BGIOSGA034703 Oryza indica BGIOSGA034703 N 0.809
SCR1 Oryza sativa OS11G0124300 N 0.809
Lus10040734.g Linum usitatissimum Lus10040734.g N 0.805
Lus10016496.g Linum usitatissimum Lus10016496.g N 0.803
AMTR_s00077p00190160 Amborella trichopoda AMTR_s00077p00190160 N 0.799
OBART11G01460 Oryza barthii OBART11G01460 N 0.797
F775_14336 Aegilops tauschii F775_14336 N 0.794
Traes_5BL_C02570726 Triticum aestivum Traes_5BL_C02570726 N 0.791
Traes_4DS_2CE9E3235 Triticum aestivum Traes_4DS_2CE9E3235 N 0.788
ORGLA11G0013300 Oryza glaberrima ORGLA11G0013300 N 0.787
Traes_4BS_A05D3DC53 Triticum aestivum Traes_4BS_A05D3DC53 N 0.786
ORUFI11G01380 Oryza rufipogon ORUFI11G01380 N 0.786
LPERR11G01210 Leersia perrieri LPERR11G01210 N 0.786
ORGLA12G0010300 Oryza glaberrima ORGLA12G0010300 N 0.784
GRMZM2G015080 Zea mays GRMZM2G015080 N 0.783
MLOC_64716 Hordeum vulgare MLOC_64716 N 0.780
Bra007056 Brassica rapa Bra007056 N 0.777
Pavir.J08573 Panicum virgatum Pavir.J08573 N 0.777
PK17372.1 Cannabis sativa PK17372.1 N 0.768
Pavir.Ha01915 Panicum virgatum Pavir.Ha01915 N 0.740
SELMODRAFT_432115 Selaginella moellendorffii SELMODRAFT_432115 N 0.719
OBART12G01190 Oryza barthii OBART12G01190 N 0.716
OLONG_010321 Oryza longistaminata OLONG_010321 N 0.716
OGLUM11G01180 Oryza glumaepatula OGLUM11G01180 N 0.716