TCM_030733 (Theobroma cacao)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03514 (GRAS) IPR005202 TCM_030733 T201625_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
EOY12138 GRAS 169 539
EOY12139 GRAS 169 539
EOY12140 GRAS 169 361
EOY12141 GRAS 169 539
EOY12142 GRAS 169 361
EOY12143 GRAS 169 361

Links

Other GRAS family TFs
Other Theobroma cacao TFs

109 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
27613.m000642 Ricinus communis 27613.m000642 N 0.843
29949.m000124 Ricinus communis 29949.m000124 N 0.800
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.749
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.789
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.745
SCL5 Arabidopsis thaliana AT1G50600 N 0.770
PAT1 Arabidopsis thaliana AT5G48150 N 0.772
BGIOSGA026022 Oryza indica BGIOSGA026022 N 0.702
Bo2g149670 Brassica oleracea Bo2g149670 N 0.751
Bo5g079990 Brassica oleracea Bo5g079990 N 0.717
Bo6g022330 Brassica oleracea Bo6g022330 N 0.770
Bo7g089080 Brassica oleracea Bo7g089080 N 0.740
Bo9g009260 Brassica oleracea Bo9g009260 N 0.748
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.770
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.759
Bra018860 Brassica rapa Bra018860 N 0.770
Bra020715 Brassica rapa Bra020715 N 0.751
Bra036185 Brassica rapa Bra036185 N 0.748
Bra037509 Brassica rapa Bra037509 N 0.728
BRADI1G23350 Brachypodium distachyon BRADI1G23350 N 0.707
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.764
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.764
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.764
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.764
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.827
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.801
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.824
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.785
Ca_09696 Cicer arietinum Ca_09696 N 0.726
Ca_09786 Cicer arietinum Ca_09786 N 0.799
Ca_13855 Cicer arietinum Ca_13855 N 0.718
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.705
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.827
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.767
Cla001429 Citrullus lanatus Cla001429 N 0.772
Cla004565 Citrullus lanatus Cla004565 N 0.756
Cucsa.042310 Cucumis sativus Cucsa.042310 N 0.743
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.780
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.775
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.767
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.827
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.805
F775_28371 Aegilops tauschii F775_28371 N 0.712
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.770
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.806
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.822
GLYMA02G46730 Glycine max GLYMA02G46730 N 0.751
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.817
GLYMA08G43780 Glycine max GLYMA08G43780 N 0.707
GLYMA09G22110 Glycine max GLYMA09G22110 N 0.718
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.812
GLYMA14G01960 Glycine max GLYMA14G01960 N 0.748
GLYMA18G09030 Glycine max GLYMA18G09030 N 0.707
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.805
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.897
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.812
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.895
GRMZM2G098517 Zea mays GRMZM2G098517 N 0.705
GRMZM2G431309 Zea mays GRMZM2G431309 N 0.712
LjSGA_018703.2 Lotus japonicus LjSGA_018703.2 N 0.755
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.707
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.764
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.743
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.789
MDP0000152670 Malus domestica MDP0000152670 N 0.794
MDP0000205236 Malus domestica MDP0000205236 N 0.812
MDP0000284679 Malus domestica MDP0000284679 N 0.812
MDP0000804652 Malus domestica MDP0000804652 N 0.791
MLOC_65838 Hordeum vulgare MLOC_65838 N 0.707
MTR_3g056110 Medicago truncatula MTR_3g056110 N 0.710
MTR_5g094450 Medicago truncatula MTR_5g094450 N 0.728
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.806
OB07G25870 Oryza brachyantha OB07G25870 N 0.717
OGLUM07G19910 Oryza glumaepatula OGLUM07G19910 N 0.707
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.707
ONIVA07G18570 Oryza nivara ONIVA07G18570 N 0.702
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.707
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.796
ORGLA07G0258500 Oryza glaberrima ORGLA07G0258500 N 0.702
ORUFI07G20980 Oryza rufipogon ORUFI07G20980 N 0.702
CIGR2 Oryza sativa OS07G0583600 N 0.702
Pavir.Ba00562 Panicum virgatum Pavir.Ba00562 N 0.715
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.753
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.786
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.756
PK09018.1 Cannabis sativa PK09018.1 N 0.767
PK15082.1 Cannabis sativa PK15082.1 N 0.772
Pm012019 Prunus mume Pm012019 N 0.818
Pm015021 Prunus mume Pm015021 N 0.799
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.808
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.799
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.802
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.791
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.802
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.806
Sb02g037650 Sorghum bicolor Sb02g037650 N 0.705
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.759
Si029418m.g Setaria italica Si029418m.g N 0.713
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.786
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.756
TCM_002319 Theobroma cacao TCM_002319 N 0.802
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.732
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.762
Traes_2BS_D007D6598 Triticum aestivum Traes_2BS_D007D6598 N 0.707
Traes_2DS_CCA2FCCAD Triticum aestivum Traes_2DS_CCA2FCCAD N 0.712
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.712
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.832
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.813