CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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VIT_06s0004g04950
(
Vitis vinifera
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03514 (GRAS)
IPR005202
VIT_06s0004g04950
T201821_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
VIT_06s0004g04950.t01
GRAS
381
752
LRTLLIHCAQVVSTYDLRTANELLKQIRQHSSPFGDGSQRLAHFFAEGLEARLAGTGTEIYTVLASKKVSAAAMLKAYELFLAACPYKMISIFFANHMILRLAEKAKVLHIIDFGILYGFQWPGLIQRLSARPGGPPKLRITGIELPQPGFRPAERVEETGRRLARYCERFNVPFEYNAIAKKWETIQIEDLKVDSNEVIAVNSMFRFKNLLDETIVVDSPRNAVLGLIRKINPHIFIHSITNGSYNAPFFVTRFREALFHFSAVFDALGNNIASENEHRLMYEKEFLGQEVMNVIACEGSERVERPETYRQWQVRTLNAGFRQLPLNQELTKKLKTKVKLGHHKDFLVDEDGNWLLQGWKGRVLFASSCWI
Links
Other
GRAS
family TFs
Other
Vitis vinifera
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VIT_06s0004g04960
Vitis vinifera
VIT_06s0004g04960
N
0.781
POPTR_0009s03790
Populus trichocarpa
POPTR_0009s03790
N
0.749
Pm000719
Prunus mume
Pm000719
N
0.743
PRUPE_ppa003149mg
Prunus persica
PRUPE_ppa003149mg
N
0.741
SapurV1A.4599s0010
Salix purpurea
SapurV1A.4599s0010
N
0.735
SapurV1A.0040s0470
Salix purpurea
SapurV1A.0040s0470
N
0.732
SapurV1A.0041s0160
Salix purpurea
SapurV1A.0041s0160
N
0.730
cassava19450.valid.m1
Manihot esculenta
cassava19450.valid.m1
N
0.722
28650.m000191
Ricinus communis
28650.m000191
N
0.722
POPTR_0001s24850
Populus trichocarpa
POPTR_0001s24850
N
0.719
TCM_041814
Theobroma cacao
TCM_041814
N
0.705
evm.TU.supercontig_81.126
Carica papaya
evm.TU.supercontig_81.126
N
0.705
TCM_041815
Theobroma cacao
TCM_041815
N
0.700