Cla001429 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla001429 T201906_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla001429 GRAS 175 545

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

86 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Cucsa.120390 Cucumis sativus Cucsa.120390 N 0.973
GLYMA02G47640 Glycine max GLYMA02G47640 N 0.865
GLYMA14G01020 Glycine max GLYMA14G01020 N 0.859
VIT_12s0057g00560 Vitis vinifera VIT_12s0057g00560 N 0.859
MDP0000152670 Malus domestica MDP0000152670 N 0.859
Gorai.001G192800 Gossypium raimondii Gorai.001G192800 N 0.856
MDP0000804652 Malus domestica MDP0000804652 N 0.854
PRUPE_ppa003702mg Prunus persica PRUPE_ppa003702mg N 0.854
MTR_5g097480 Medicago truncatula MTR_5g097480 N 0.854
gene21592-v1.0-hybrid Fragaria vesca gene21592-v1.0-hybrid N 0.854
Pm015021 Prunus mume Pm015021 N 0.854
POPTR_0014s16230 Populus trichocarpa POPTR_0014s16230 N 0.854
Gorai.007G167000 Gossypium raimondii Gorai.007G167000 N 0.848
evm.TU.supercontig_136.17 Carica papaya evm.TU.supercontig_136.17 N 0.848
TCM_002319 Theobroma cacao TCM_002319 N 0.846
SapurV1A.0054s0160 Salix purpurea SapurV1A.0054s0160 N 0.846
Ca_09786 Cicer arietinum Ca_09786 N 0.840
Eucgr.A01051 Eucalyptus grandis Eucgr.A01051 N 0.832
orange1.1g009376m.g Citrus sinensis orange1.1g009376m.g N 0.824
PGSC0003DMG400006132 Solanum tuberosum PGSC0003DMG400006132 N 0.824
Solyc07g047950.1 Solanum lycopersicum Solyc07g047950.1 N 0.824
Ciclev10014845m.g Citrus clementina Ciclev10014845m.g N 0.824
Lus10012323.g Linum usitatissimum Lus10012323.g N 0.813
Bo9g009260 Brassica oleracea Bo9g009260 N 0.813
PK09018.1 Cannabis sativa PK09018.1 N 0.805
Bra036185 Brassica rapa Bra036185 N 0.802
Carubv10026289m.g Capsella rubella Carubv10026289m.g N 0.797
PAT1 Arabidopsis thaliana AT5G48150 N 0.797
Cagra.2766s0005 Capsella grandiflora Cagra.2766s0005 N 0.797
27613.m000642 Ricinus communis 27613.m000642 N 0.794
cassava10826.m1 Manihot esculenta cassava10826.m1 N 0.794
cassava34699.m1 Manihot esculenta cassava34699.m1 N 0.791
Aquca_005_00234 Aquilegia coerulea Aquca_005_00234 N 0.791
Bra020715 Brassica rapa Bra020715 N 0.789
Bo2g149670 Brassica oleracea Bo2g149670 N 0.789
SCL5 Vitis vinifera VIT_19s0090g01740 N 0.786
PAT1 Arabidopsis lyrata scaffold_801100.1 N 0.783
Bostr.5224s0004 Boechera stricta Bostr.5224s0004 N 0.780
Lus10006369.g Linum usitatissimum Lus10006369.g N 0.772
TCM_030733 Theobroma cacao TCM_030733 N 0.772
Lus10016596.g Linum usitatissimum Lus10016596.g N 0.772
Aquca_028_00248 Aquilegia coerulea Aquca_028_00248 N 0.770
Thhalv10004053m.g Eutrema salsugineum Thhalv10004053m.g N 0.770
Bo7g089080 Brassica oleracea Bo7g089080 N 0.770
SapurV1A.0030s0420 Salix purpurea SapurV1A.0030s0420 N 0.764
gene03551-v1.0-hybrid Fragaria vesca gene03551-v1.0-hybrid N 0.762
MDP0000205236 Malus domestica MDP0000205236 N 0.759
MDP0000284679 Malus domestica MDP0000284679 N 0.759
SCL5 Populus trichocarpa POPTR_0001s37270 N 0.759
Pm012019 Prunus mume Pm012019 N 0.756
Gorai.002G096300 Gossypium raimondii Gorai.002G096300 N 0.751
cassava34106.m1 Manihot esculenta cassava34106.m1 N 0.751
Solyc07g065270.1 Solanum lycopersicum Solyc07g065270.1 N 0.748
29949.m000124 Ricinus communis 29949.m000124 N 0.743
evm.TU.supercontig_12.194 Carica papaya evm.TU.supercontig_12.194 N 0.743
PGSC0003DMG400022187 Solanum tuberosum PGSC0003DMG400022187 N 0.743
Bra037509 Brassica rapa Bra037509 N 0.743
cassava8885.m1 Manihot esculenta cassava8885.m1 N 0.743
Gorai.009G446100 Gossypium raimondii Gorai.009G446100 N 0.743
AMTR_s00088p00161000 Amborella trichopoda AMTR_s00088p00161000 N 0.740
Ciclev10007927m.g Citrus clementina Ciclev10007927m.g N 0.740
PRUPE_ppa004136mg Prunus persica PRUPE_ppa004136mg N 0.740
Bostr.19424s0023 Boechera stricta Bostr.19424s0023 N 0.724
SCL21 Arabidopsis thaliana AT2G04890 N 0.724
SCL21 Arabidopsis lyrata scaffold_303269.1 N 0.721
PDK_20s1411471g003 Phoenix dactylifera PDK_20s1411471g003 N 0.721
Eucgr.F03523 Eucalyptus grandis Eucgr.F03523 N 0.715
Thhalv10002541m.g Eutrema salsugineum Thhalv10002541m.g N 0.713
Bo6g022330 Brassica oleracea Bo6g022330 N 0.710
SCL5 Arabidopsis thaliana AT1G50600 N 0.710
SCL5 Arabidopsis lyrata fgenesh2_kg.1__4145__AT1G50600.1 N 0.710
Bra018860 Brassica rapa Bra018860 N 0.710
Cagra.1158s0007 Capsella grandiflora Cagra.1158s0007 N 0.707
Bostr.26675s0117 Boechera stricta Bostr.26675s0117 N 0.707
Carubv10015685m.g Capsella rubella Carubv10015685m.g N 0.707
OPUNC07G19030 Oryza punctata OPUNC07G19030 N 0.705
PK15082.1 Cannabis sativa PK15082.1 N 0.705
LPERR07G17460 Leersia perrieri LPERR07G17460 N 0.705
Ca_13855 Cicer arietinum Ca_13855 N 0.705
chr6.LjT11E14.20.nc Lotus japonicus chr6.LjT11E14.20.nc N 0.702
Thhalv10011379m.g Eutrema salsugineum Thhalv10011379m.g N 0.702
OMERI07G16830 Oryza meridionalis OMERI07G16830 N 0.702
SCL13 Vitis vinifera VIT_00s0463g00020 N 0.702
Carubv10008830m.g Capsella rubella Carubv10008830m.g N 0.702
Cagra.7055s0004 Capsella grandiflora Cagra.7055s0004 N 0.702
Bo7g030310 Brassica oleracea Bo7g030310 N 0.702