Cla006433 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla006433 T201914_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla006433 GRAS 46 468

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

63 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.055340 Cucumis sativus Cucsa.055340 N 0.943
Pm012190 Prunus mume Pm012190 N 0.809
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.807
TCM_040833 Theobroma cacao TCM_040833 N 0.798
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.792
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.788
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.785
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.785
SCL3 Populus trichocarpa POPTR_0009s05330 N 0.781
Ca_11133 Cicer arietinum Ca_11133 N 0.777
SapurV1A.0415s0050 Salix purpurea SapurV1A.0415s0050 N 0.775
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.773
PGSC0003DMG400004649 Solanum tuberosum PGSC0003DMG400004649 N 0.770
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.768
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.768
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.767
30024.m001746 Ricinus communis 30024.m001746 N 0.764
Solyc12g099900.1 Solanum lycopersicum Solyc12g099900.1 N 0.764
cassava31043.valid.m1 Manihot esculenta cassava31043.valid.m1 N 0.763
Ca_27441 Cicer arietinum Ca_27441 N 0.762
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.759
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.756
GLYMA12G02490 Glycine max GLYMA12G02490 N 0.755
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.755
Cagra.0860s0005 Capsella grandiflora Cagra.0860s0005 N 0.749
Carubv10008999m.g Capsella rubella Carubv10008999m.g N 0.747
SCL3 Arabidopsis thaliana AT1G50420 N 0.745
Bostr.26675s0133 Boechera stricta Bostr.26675s0133 N 0.743
Gorai.013G252600 Gossypium raimondii Gorai.013G252600 N 0.742
Thhalv10011447m.g Eutrema salsugineum Thhalv10011447m.g N 0.741
SCL3 Arabidopsis lyrata fgenesh2_kg.1__4122__AT1G50420.1 N 0.741
PGSC0003DMG400022709 Solanum tuberosum PGSC0003DMG400022709 N 0.738
Lus10009717.g Linum usitatissimum Lus10009717.g N 0.736
30131.m007244 Ricinus communis 30131.m007244 N 0.733
Bra014251 Brassica rapa Bra014251 N 0.732
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.730
Solyc01g008910.2 Solanum lycopersicum Solyc01g008910.2 N 0.730
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.727
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.727
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.727
chr1.CM0794.360.nd Lotus japonicus chr1.CM0794.360.nd N 0.726
Lus10022418.g Linum usitatissimum Lus10022418.g N 0.723
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.722
Bra018848 Brassica rapa Bra018848 N 0.719
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.719
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.719
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.719
Bo3g179450 Brassica oleracea Bo3g179450 N 0.718
Bo5g078760 Brassica oleracea Bo5g078760 N 0.718
GLYMA01G43620 Glycine max GLYMA01G43620 N 0.716
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.716
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.713
TCM_042392 Theobroma cacao TCM_042392 N 0.711
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.708
GLYMA11G01850 Glycine max GLYMA11G01850 N 0.707
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.706
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.706
Bo6g022200 Brassica oleracea Bo6g022200 N 0.705
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.703
mgf008315m Mimulus guttatus mgf008315m N 0.703
mgf022906m Mimulus guttatus mgf022906m N 0.700
PK02707.1 Cannabis sativa PK02707.1 N 0.700
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.700