Cla012038 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla012038 T201920_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla012038 GRAS 311 672

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

40 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.087900 Cucumis sativus Cucsa.087900 N 0.986
PK23183.1 Cannabis sativa PK23183.1 N 0.895
Lus10041540.g Linum usitatissimum Lus10041540.g N 0.873
30131.m007029 Ricinus communis 30131.m007029 N 0.868
orange1.1g045762m.g Citrus sinensis orange1.1g045762m.g N 0.868
Ciclev10018153m.g Citrus clementina Ciclev10018153m.g N 0.868
TCM_017269 Theobroma cacao TCM_017269 N 0.865
Lus10012554.g Linum usitatissimum Lus10012554.g N 0.865
Pm016121 Prunus mume Pm016121 N 0.865
PRUPE_ppa024399mg Prunus persica PRUPE_ppa024399mg N 0.862
GLYMA16G05751 Glycine max GLYMA16G05751 N 0.862
GLYMA19G26735 Glycine max GLYMA19G26735 N 0.862
cassava38785.m1 Manihot esculenta cassava38785.m1 N 0.860
Solyc02g094340.1 Solanum lycopersicum Solyc02g094340.1 N 0.857
VIT_14s0068g01610 Vitis vinifera VIT_14s0068g01610 N 0.854
POPTR_0001s33360 Populus trichocarpa POPTR_0001s33360 N 0.854
evm.TU.supercontig_70.116 Carica papaya evm.TU.supercontig_70.116 N 0.854
MTR_7g027190 Medicago truncatula MTR_7g027190 N 0.854
PGSC0003DMG400020243 Solanum tuberosum PGSC0003DMG400020243 N 0.854
Gorai.006G044300 Gossypium raimondii Gorai.006G044300 N 0.851
gene01356-v1.0-hybrid Fragaria vesca gene01356-v1.0-hybrid N 0.851
Eucgr.H03356 Eucalyptus grandis Eucgr.H03356 N 0.834
mgf025393m Mimulus guttatus mgf025393m N 0.831
Aquca_011_00061 Aquilegia coerulea Aquca_011_00061 N 0.807
Aquca_021_00065 Aquilegia coerulea Aquca_021_00065 N 0.804
PK25517.1 Cannabis sativa PK25517.1 N 0.785
Pavir.J25769 Panicum virgatum Pavir.J25769 N 0.782
Eucgr.I01625 Eucalyptus grandis Eucgr.I01625 N 0.749
Si027708m.g Setaria italica Si027708m.g N 0.727
Sb05g018070 Sorghum bicolor Sb05g018070 N 0.723
LPERR11G11520 Leersia perrieri LPERR11G11520 N 0.716
BRADI4G18390 Brachypodium distachyon BRADI4G18390 N 0.715
OPUNC11G12230 Oryza punctata OPUNC11G12230 N 0.714
GRMZM2G342217 Zea mays GRMZM2G342217 N 0.712
AMTR_s00016p00207780 Amborella trichopoda AMTR_s00016p00207780 N 0.709
ONIVA11G13990 Oryza nivara ONIVA11G13990 N 0.709
OBART11G14550 Oryza barthii OBART11G14550 N 0.706
OGLUM11G14080 Oryza glumaepatula OGLUM11G14080 N 0.706
ORGLA11G0124900 Oryza glaberrima ORGLA11G0124900 N 0.706
Traes_2BS_D32231DB0 Triticum aestivum Traes_2BS_D32231DB0 N 0.703