CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla014227
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla014227
T201926_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla014227
GRAS
70
467
MEQLLVHCANAIETNDATLAQQILWVLNNIAPPDGDSNQRLTSAFLRALVTRATNTGNCKILAAITTAFSSSLTTHTFSLMDLAAFVDLTPWHRFGFTAANVAILDAIEGYSVVHVVDFSLMHCMQIPTLIDAIATRFEVPPLLKLTTVAVVAVKDASPMLELSYDELGAKLVNFARSKNVTMEFRVVPSCHTDGFASLIEQIRMQNLIYGPENNEALVFNCHMMLHYIPEETLNPNPSPNFDMSSTSIRSMFLKAIRSLDPTIVVLVDEDADFTSSKLVTRLRSAFNYLWIPYDSMDSFLPRSSKQREWYEADICWKIENVIAQEGIQRVQRLEPKGRWVQRMVNAKFRGVPFGEDAVTEVKGMLDEHAGGWGLKKEEDHLLLTWKGHDVVFATAWV
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.103040
Cucumis sativus
Cucsa.103040
N
0.941
Traes_2AS_E17243D52
Triticum aestivum
Traes_2AS_E17243D52
N
0.907
Traes_2DS_9A08AAEE4
Triticum aestivum
Traes_2DS_9A08AAEE4
N
0.855
TCM_000764
Theobroma cacao
TCM_000764
N
0.730
gene05720-v1.0-hybrid
Fragaria vesca
gene05720-v1.0-hybrid
N
0.726
orange1.1g043764m.g
Citrus sinensis
orange1.1g043764m.g
N
0.724
Solyc02g092570.1
Solanum lycopersicum
Solyc02g092570.1
N
0.724
Ciclev10025567m.g
Citrus clementina
Ciclev10025567m.g
N
0.724
PGSC0003DMG400024937
Solanum tuberosum
PGSC0003DMG400024937
N
0.722
cassava10176.m1
Manihot esculenta
cassava10176.m1
N
0.720
Pm002406
Prunus mume
Pm002406
N
0.715
Gorai.007G221900
Gossypium raimondii
Gorai.007G221900
N
0.714
PRUPE_ppa005079mg
Prunus persica
PRUPE_ppa005079mg
N
0.712
POPTR_0007s10030
Populus trichocarpa
POPTR_0007s10030
N
0.711
MDP0000247514
Malus domestica
MDP0000247514
N
0.710
Aquca_042_00139
Aquilegia coerulea
Aquca_042_00139
N
0.707
VIT_07s0129g00340
Vitis vinifera
VIT_07s0129g00340
N
0.707
SapurV1A.0116s0200
Salix purpurea
SapurV1A.0116s0200
N
0.702
29661.m000901
Ricinus communis
29661.m000901
N
0.701