CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Cla014744
(
Citrullus lanatus
)
GRAS
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03514 (GRAS)
IPR005202
Cla014744
T201930_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Cla014744
GRAS
180
553
LLKVLLDCARLCDSEPNRAAKGLNRISKSLREDGDPAERVAFYFGEALRKRLSLTVMKNCLDTTESDANSEDFLLSYKALNDACPYSKFAHLTANQAILEATERASKIHIVDFGIVQGVQWAALLQALATRATGKPSRVRISGIPAPSLGDSPAASLYATGNRLSEFAKLLELNFEFEPILTPIENLNESSFSVQSDEVLAVNFMLQLYNLLDEDPAGVHNALRLAKSLSPQIVTLGEYEAGLNRIGFYNRFKNALKFYSAIFESLEPNLPRDSPERLQLEKLLLGRRIAGVVGTEEDSRNKRRVRMEDKDQWKNLMESAGFEPVALSHYAISQGKILLWNYNYSSLYTLIESAPEFLSLAWNEVPLLTVSSWR
Links
Other
GRAS
family TFs
Other
Citrullus lanatus
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Cucsa.201400
Cucumis sativus
Cucsa.201400
N
0.904
TCM_000399
Theobroma cacao
TCM_000399
N
0.780
Gorai.003G015400
Gossypium raimondii
Gorai.003G015400
N
0.755
PRUPE_ppa003124mg
Prunus persica
PRUPE_ppa003124mg
N
0.749
29634.m002156
Ricinus communis
29634.m002156
N
0.747
Pm026616
Prunus mume
Pm026616
N
0.747
cassava18797.valid.m1
Manihot esculenta
cassava18797.valid.m1
N
0.744
Gorai.008G068100
Gossypium raimondii
Gorai.008G068100
N
0.744
cassava35611.valid.m1
Manihot esculenta
cassava35611.valid.m1
N
0.738
MDP0000575908
Malus domestica
MDP0000575908
N
0.737
evm.TU.supercontig_6.108
Carica papaya
evm.TU.supercontig_6.108
N
0.736
gene14780-v1.0-hybrid
Fragaria vesca
gene14780-v1.0-hybrid
N
0.735
PK13108.1
Cannabis sativa
PK13108.1
N
0.726
Cucsa.127390
Cucumis sativus
Cucsa.127390
N
0.716
Aquca_010_00478
Aquilegia coerulea
Aquca_010_00478
N
0.714
SapurV1A.1131s0040
Salix purpurea
SapurV1A.1131s0040
N
0.711
VIT_04s0023g01660
Vitis vinifera
VIT_04s0023g01660
N
0.710
POPTR_0007s12760
Populus trichocarpa
POPTR_0007s12760
N
0.708
Lus10024014.g
Linum usitatissimum
Lus10024014.g
N
0.708
Lus10041740.g
Linum usitatissimum
Lus10041740.g
N
0.702
Cla014426
Citrullus lanatus
Cla014426
N
0.700