Cla020893 (Citrullus lanatus)
GRAS

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03514 (GRAS) IPR005202 Cla020893 T201942_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cla020893 GRAS 48 463

Links

Other GRAS family TFs
Other Citrullus lanatus TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Cucsa.308180 Cucumis sativus Cucsa.308180 N 0.981
30131.m007244 Ricinus communis 30131.m007244 N 0.824
Ciclev10031389m.g Citrus clementina Ciclev10031389m.g N 0.818
cassava1375.valid.m1 Manihot esculenta cassava1375.valid.m1 N 0.815
cassava1376.valid.m1 Manihot esculenta cassava1376.valid.m1 N 0.815
orange1.1g011736m.g Citrus sinensis orange1.1g011736m.g N 0.815
evm.TU.supercontig_197.7 Carica papaya evm.TU.supercontig_197.7 N 0.812
POPTR_0001s06090 Populus trichocarpa POPTR_0001s06090 N 0.810
cassava20989.m1 Manihot esculenta cassava20989.m1 N 0.805
SapurV1A.0504s0280 Salix purpurea SapurV1A.0504s0280 N 0.796
Gorai.012G080500 Gossypium raimondii Gorai.012G080500 N 0.793
SapurV1A.0009s0760 Salix purpurea SapurV1A.0009s0760 N 0.785
TCM_042392 Theobroma cacao TCM_042392 N 0.785
SapurV1A.1723s0080 Salix purpurea SapurV1A.1723s0080 N 0.780
VIT_13s0019g01220 Vitis vinifera VIT_13s0019g01220 N 0.779
POPTR_0003s20100 Populus trichocarpa POPTR_0003s20100 N 0.774
PK02707.1 Cannabis sativa PK02707.1 N 0.771
Gorai.013G015100 Gossypium raimondii Gorai.013G015100 N 0.768
Aquca_014_00674 Aquilegia coerulea Aquca_014_00674 N 0.755
Eucgr.G03258 Eucalyptus grandis Eucgr.G03258 N 0.751
Pm016466 Prunus mume Pm016466 N 0.751
PRUPE_ppa005439mg Prunus persica PRUPE_ppa005439mg N 0.751
Pm029840 Prunus mume Pm029840 N 0.751
SCL3 Vitis vinifera VIT_06s0009g02390 N 0.741
orange1.1g014413m.g Citrus sinensis orange1.1g014413m.g N 0.736
Gorai.006G125700 Gossypium raimondii Gorai.006G125700 N 0.734
Ciclev10015219m.g Citrus clementina Ciclev10015219m.g N 0.733
gene14438-v1.0-hybrid Fragaria vesca gene14438-v1.0-hybrid N 0.733
TCM_040833 Theobroma cacao TCM_040833 N 0.732
Ca_11133 Cicer arietinum Ca_11133 N 0.726
Lus10039562.g Linum usitatissimum Lus10039562.g N 0.725
Pm012190 Prunus mume Pm012190 N 0.725
Lus10024177.g Linum usitatissimum Lus10024177.g N 0.725
evm.TU.supercontig_84.12 Carica papaya evm.TU.supercontig_84.12 N 0.723
PRUPE_ppa005243mg Prunus persica PRUPE_ppa005243mg N 0.722
chr3.CM0460.90.nd Lotus japonicus chr3.CM0460.90.nd N 0.718
Eucgr.B03716 Eucalyptus grandis Eucgr.B03716 N 0.716
MTR_5g009080 Medicago truncatula MTR_5g009080 N 0.715
chr2.CM0018.90.nc Lotus japonicus chr2.CM0018.90.nc N 0.715
Ca_27441 Cicer arietinum Ca_27441 N 0.712
GLYMA11G10170 Glycine max GLYMA11G10170 N 0.705
PDK_20s1303935g001 Phoenix dactylifera PDK_20s1303935g001 N 0.704
MTR_4g076140 Medicago truncatula MTR_4g076140 N 0.704
cassava13860.valid.m1 Manihot esculenta cassava13860.valid.m1 N 0.701